Helicobacter pylori Lithuania75: HPLT_00045
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Entry
HPLT_00045 CDS
T01896
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPLT_00045 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hph03019
]
HPLT_00045 (groEL)
03110 Chaperones and folding catalysts [BR:
hph03110
]
HPLT_00045 (groEL)
03029 Mitochondrial biogenesis [BR:
hph03029
]
HPLT_00045 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hph04147
]
HPLT_00045 (groEL)
Enzymes [BR:
hph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPLT_00045 (groEL)
Messenger RNA biogenesis [BR:
hph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPLT_00045 (groEL)
Chaperones and folding catalysts [BR:
hph03110
]
Heat shock proteins
HSP60 / Chaperonin
HPLT_00045 (groEL)
Mitochondrial biogenesis [BR:
hph03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPLT_00045 (groEL)
Exosome [BR:
hph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPLT_00045 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HPLT_00045 (groEL)
Exosomal proteins of breast cancer cells
HPLT_00045 (groEL)
Exosomal proteins of colorectal cancer cells
HPLT_00045 (groEL)
Exosomal proteins of bladder cancer cells
HPLT_00045 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADU82474
LinkDB
All DBs
Position
complement(7742..9382)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattttcagatagcgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgttaaagttaccatggggccaagaggcaggaacgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagacggcgtgagcgtagctaaggagattgaa
ttaagttgcccggtggctaacatgggcgctcagctcgttaaagaagtagcgagcaaaacc
gctgatgccgctggcgatggcacgaccacagcgaccgtgctggcttatagcatttttaaa
gaaggtttgaggaatatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaagcgattattaatgagcttaaaaaagcgagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatatcgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaggctaag
ggcattgaagatgaattagatgtcgtagagggcatgcaatttgatagaggctacctctcc
ccttattttgtaaccaacgctgagaaaatgactgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacaggagaaaagaaatgctcaaagacatcgctattttaaccggcggtcaagtcatt
agcgaagaattgggcttgagtctagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagttgcgcaaatcaaaacccagattgcaagcacgacaagcgattacgac
aaagaaaaattgcaagaaagattggccaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggtggatgacgcgttgagc
gcgactaaagcggcggttgaagaaggcattgtgattggtggcggtgcggctctcattcgc
gcggctcaaaaagtgcatttgaatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattggctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtagaaaaacatgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcggccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggcggtatgatgtaa
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