KEGG   Helicobacter pylori Lithuania75: HPLT_00080
Entry
HPLT_00080        CDS       T01896                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hph  Helicobacter pylori Lithuania75
Brite
KEGG Orthology (KO) [BR:hph00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hph02044]
    HPLT_00080
Secretion system [BR:hph02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPLT_00080
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 AAA_29 nSTAND3 RsgA_GTPase AAA_10 TraG-D_C AAA_23 AAA_22 AAA_16 ABC_tran AAA_7 ResIII DUF5727 PduV-EutP T2SSE SMC_N CbiA Mg_chelatase
Other DBs
NCBI-ProteinID: ADU82481
LinkDB
Position
14390..16753
AA seq 787 aa
MLEKLLSAIKQKVSNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQMALDSLEKVVARLVVKRRKIDHQQNIQADSKYLQAILNQFENKE
VYENQYFLVLESAHSLQGVLEHKKKSLMHANRENFKDILSYKAHFLQETLKSLEIQLKNY
APKLLSSKEVLNFYAEYINGFDLPLKPLVGGYLSDSYIASSITFEKDYFIQESFNQKTYN
RLIGIKAYESERITSIAVGALLYQETPLDIIFSIEPMSVHKTLGFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLENLDAQTSLVLGLLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLF
NFHNQEVSHNNAKEIARVNGHTLIIGATGSGKSTLISFLMMSALKYQNMRLLAFDRMQGL
YSFTKFFKGHYHDGKSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRDKEALEDMNAIS
SAIKSLYEALYPKDFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDAFNSNAFLNV
INLDTITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNAKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNIGTLILYPQKNARELKHHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGNSNMIDVSLESLGRYLKIFNSDSSHVNKVKALQKDYPTEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgttagaaaagcttttgagcgctatcaaacaaaaagtttcaaactattttttaggggtt
ttgcctaaaagctattcaatgagtgaagaaaacaacattttaggcttgtatgatgagcat
tttttactcactaaaaacgaaaacttagtgggcatcctccgtttagagggggtgagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccagatggcgttggat
tctttagaaaaagtcgtggcgcgccttgtggttaaaaggcgtaaaattgatcaccaacaa
aacattcaagctgactctaaatacttgcaagcgattttgaatcaatttgaaaacaaagaa
gtgtatgaaaatcagtattttttagttttagaaagcgcgcattctttacagggcgttttg
gagcataagaaaaaatctctaatgcatgccaatagggaaaattttaaggacatcctctct
tataaagcgcattttttgcaagaaactttaaaaagcttagaaatccagctcaaaaattat
gcccccaaactcttaagctccaaagaggttttgaatttttacgcagaatacattaacggg
tttgatctccccttaaagcccctagtaggggggtatttgagcgatagctatatcgctagt
tctatcacttttgaaaaagattatttcattcaagaaagctttaaccaaaaaacctataac
cgcttgattggcattaaagcttatgagagcgaacgcatcacttctatagcggtgggagcg
cttttataccaagagactccactagatattatcttttctatagagcctatgagcgtgcat
aaaacgctgggttttttaaaagagagggccaagtttagcatgtccaatctcgttaaaaac
gagctgctagaataccaggaactggtcaaaaccaaacgcctatccatgcaaaaattcgcc
ctaaacattcttatcaaagcccctagtttagaaaatttagacgctcaaacgagcttggtt
ttagggcttttatttaaagaaaacttagtgggcgttatagaaacttttggcttgaaaggg
gggtatttttcctttttccctgaacgcatccacttaaaccaccgcttgcgttttttaact
tctaaagccctagcgtgtttgatggtgtttgaaaggcaaaatttaggctttaaggctaat
tcatgggggaatagccctttgagcgtgtttaaaaatttggattactccccttttttattc
aatttccacaaccaagaagtgagccacaataacgctaaagaaatcgctagagtgaacggg
catactctaatcataggggctaccgggagcggtaaaagcacgctgattagctttttaatg
atgagcgctttgaaataccaaaacatgcgccttttagcatttgacaggatgcaagggctg
tattctttcacaaaattttttaaagggcattaccatgacggcaaatcttttagcatcaac
cccttttgcttagagcctaatttgcagaatttagaatttttgcaatccttctttttgagc
atgtttgatcttgccccttcaagggataaagaagccttggaggacatgaatgcgatttct
agcgcgattaagagcctttatgaggccttataccctaaagattttagtttgctagacttt
aaagaaacgcttaaaagaacctcatctaaccaattgggcttgagtttagagccgtatttg
aataaccccctttttaacgctttgaatgacgcgttcaattccaacgcttttttaaatgtg
ataaacctagacaccatcacccaaaaccccaaagacttagggcttttagcctattacttg
ttttataaaatcttagaagaatccaggaaaaacgacagcggctttttggtttttttagac
gagtttaaatcctatgtggaaaacgatttactgaacgctaaaattaacgctttaatcacg
caagccagaaaagctaatggcgtggtggtgttggctttgcaagacatttaccaattaagc
ggggttaaaaacgctcatagttttttaagcaacatagggactcttattttgtatccgcaa
aaaaacgctagggagttgaaacaccacttcaatgtgcctttgagcgaaaccgaaatttct
tttttagaaaacacccctttgtatgccaggcaggttttagtcaaaaatttgggtaacggg
aattctaacatgattgatgtgagtttggaaagtttagggcgttatttgaaaatctttaat
tcagactctagccatgtgaacaaagtgaaagcgttacaaaaagactaccctacagagtgg
cgtgagaaacttttgaagagctag

DBGET integrated database retrieval system