Helicobacter pylori Lithuania75: HPLT_00620
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Entry
HPLT_00620 CDS
T01896
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hph
Helicobacter pylori Lithuania75
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hph03032
]
HPLT_00620
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_00620
Enzymes [BR:
hph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPLT_00620
DNA replication proteins [BR:
hph03032
]
Prokaryotic type
DNA Topoisomerases
HPLT_00620
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPLT_00620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
DUF7575
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ADU82569
LinkDB
All DBs
Position
117340..119550
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDRER
EIKAFKPLTYFTLDALFEPHLEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYFISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELKLYALIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCRY
VKQTENANDGANQELCEKCGGEMVQKFSRNGALLACNNYPECKNTKSLKNTPNAKETIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCHFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIKCKERVFLEEENG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagttattgcctctaaagggcatgttagggatttatccaaattcgct
ttaggtattaagattgatgaaacaggatttacccctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagaactttctaaaaaagcatctattacttatatcgct
actgatgaagacagagaaggggaggcgataggctatcatgtggcatgcttgattgggggg
aaattggagagctaccctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gccctaaaaaccccacgacaaattgacatgtctaaggtcaatgcccaacaagccaggcgt
tttttagatcggatcgtgggtttcaagctcagctcgttgatttcatctaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagcgcggctttaaagcttgtgattgatagagaaagg
gaaatcaaagcctttaagcctttaacctacttcacgctagacgctttgtttgagccgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaagaactcattgat
gaaaaaaaagcccaagagattaaaaacgaattagaaaaagaaagttattttatttctagt
atcgttaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttatatgaaggcgtagccaccccacaaggcgttatgggcgtgatcacttacatgaggact
gatagcttgaatatcgctaaagaggctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttgccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctatgccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagctagtgggagaaagctcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaatgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagagcctccagcacgctattcagaagcgagtttgatt
aaagttttagaaagtttaggcataggcaggcctagcacctacgccccaacgatttctctc
ttgcaaaacagagactatattaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaagtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaagagcttgataatatcgctcaaaataaagccgactaccagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgtgggggggaattagtc
aaaaagaatagccgttatggggagtttatcgcttgtaataattaccctaaatgcagatac
gtcaaacaaactgaaaacgccaatgatggagccaatcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgcttttagcttgcaacaactaccct
gaatgcaaaaacactaaatcgttaaaaaacacccctaacgccaaagaaacaatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggctgtaacaattaccctaaatgccattttttatccaaccataagcccatcaacaag
cgttgtgagaaatgccattatttgatgagtgaaagaatctatcgcaaaaaaaaggcacat
gaatgcatcaaatgcaaagagcgcgtgtttttagaggaagagaatggctaa
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