Helicobacter pylori Lithuania75: HPLT_00960
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Entry
HPLT_00960 CDS
T01896
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph00260
Glycine, serine and threonine metabolism
hph00460
Cyanoamino acid metabolism
hph00630
Glyoxylate and dicarboxylate metabolism
hph00670
One carbon pool by folate
hph00680
Methane metabolism
hph01100
Metabolic pathways
hph01110
Biosynthesis of secondary metabolites
hph01120
Microbial metabolism in diverse environments
hph01200
Carbon metabolism
hph01230
Biosynthesis of amino acids
hph01240
Biosynthesis of cofactors
hph04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPLT_00960
09102 Energy metabolism
00680 Methane metabolism
HPLT_00960
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPLT_00960
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPLT_00960
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPLT_00960
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPLT_00960
Enzymes [BR:
hph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPLT_00960
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Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADU82637
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Position
181027..182277
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVADEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgaattgatctttgaagaatat
aagcggcaaaatgagcatttagaaatgatagcgagcgaaaattacacttttcctagcgtt
atggaagctatgggaagcattttaacgaataaatacgctgagggttatcctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctggctatagaaagggctaaa
aagctttttaattgccagttcgctaacgtgcaagcgcattcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaggtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggctatattgattatgaagaagcgctaaaaatcgctcag
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggaaattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttactactaggcgatatagcccat
gtggcagggcttgtggtcgctgatgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattctaactaatgac
gaagaaatagcggctaagattgataaagcgatttttccagggactcaaggcgggcctttg
atgcatgtaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttacgcacaattagtgaaatctaacatgcaagttttggctaaagcgttaaaagaaaaa
aaccataagttagtgagcggtggcacttctaaccatttgcttttaatggatttcttagat
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggctagtcaattccctgtgtaccaacaacctattttttaa
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