Helicobacter pylori Lithuania75: HPLT_01000
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Entry
HPLT_01000 CDS
T01896
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph00020
Citrate cycle (TCA cycle)
hph00190
Oxidative phosphorylation
hph00620
Pyruvate metabolism
hph00650
Butanoate metabolism
hph00720
Other carbon fixation pathways
hph01100
Metabolic pathways
hph01110
Biosynthesis of secondary metabolites
hph01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HPLT_01000 (frdB)
00620 Pyruvate metabolism
HPLT_01000 (frdB)
00650 Butanoate metabolism
HPLT_01000 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HPLT_01000 (frdB)
00720 Other carbon fixation pathways
HPLT_01000 (frdB)
Enzymes [BR:
hph01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HPLT_01000 (frdB)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
HPLT_01000 (frdB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_16
Fer4_9
Fer2
Fer4_7
Silic_transp
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
ADU82642
LinkDB
All DBs
Position
complement(187961..188698)
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AA seq
245 aa
AA seq
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MSDNERTIVVRVLKFDPQSAVSKPHFKEYQLKETPSMTLFIALNLIREHQDPDLSFDFVC
RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR
VESWAHSKEEVDITQPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPNFIGAAGMN
RAMRFMIDRHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK
VGKSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatgaacgaacgattgtagtcagagtgctaaaatttgaccctcaaagcgcg
gtgagtaagccgcattttaaagagtatcaattgaaagaaacgccatccatgacgctcttt
atcgctttgaatctcatcagagagcatcaagatccggatttgagctttgattttgtgtgc
cgcgctgggatttgcggctcttgcgcgatgatggttaatgggagaccgagattggcttgt
aaaaccctaacttctagttttgaaagcggggtgattacgctcatgcccatgcccagtttt
acactcattaaagatttgagcgtgaatacgggcgattggtttttagatatgactaaaagg
gtggagagctgggcgcattctaaagaagaagtggatattactcagccggaaaaaaggatt
gaacctgatgaagcccaagaagtctttgaactagacaggtgtattgaatgcgggtgctgt
atcgcttcttgcgggactaaactcatgcgccctaatttcattggagctgccggcatgaac
agagccatgcgctttatgattgacagacacgatgaaagaagcgatgacgatttttatgag
ttagtgggcgatgatgatggcgtttttgggtgcatgagcttgattgcttgccatgatact
tgccctaaagaattacccttgcaaagcagtatcgctactttgcgtaataggatgttgaaa
gtgggtaaaagccgctaa
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