Helicobacter pylori Lithuania75: HPLT_01170
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Entry
HPLT_01170 CDS
T01896
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hph
Helicobacter pylori Lithuania75
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_01170
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPLT_01170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
nSTAND_NTPase5
AAA_24
NTPase_1
RecA_N
AAA_14
AAA_16
SLFN-g3_helicase
ATPase_2
NACHT
AAA_31
ABC_tran
AAA_22
nSTAND3
CbiA
DUF7129
DAP3
AAA_5
NPHP3_N
ArsA_ATPase
Zeta_toxin
GvpD_P-loop
AAA_30
MeaB
AAA
SRP54
RsgA_GTPase
zf-C2H2_7th_ZNF462
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADU82676
LinkDB
All DBs
Position
222512..223858
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AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQAQKEVLHALKKPLPKAQKSVSI
AAIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRAIRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRDIAIFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgaatgtcagcattgcggttttacaagccctaagtgg
ctgggcaagtgcgttcaatgcaacgcatgggagagttttatagaattgaaccaagctcaa
aaggaagttttacacgcgcttaaaaaaccgctcccaaaagcgcaaaaaagcgtttctatc
gctgcaattgagcatgaagaagtgattaagttttcttccactcaaagcgaattggatatt
gttttaggtggggggatcgctaaaggggggttgtatttagtgggggggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccattagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggctaat
attgagagcgaaaattattttgcttgcgtgattgattccatccaaacgctttattcgcca
gagatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggccaaaacaagagatattgctatttttatcatcggtcatatcactaaagaaggg
agtattgcagggcctagagtgttagagcatatggtggatagcgtgctgtattttgagggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgagatgaaagagcagggtttggtgagcgctaaagaagcttcaagc
ttgtttttttctaaagaagagcctatggaggggagtgcgattaccatcactttagaaggc
tcaagagcgttgattttagagattcaggcgttggtgagcgagtgcagttttggagcgccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgcttattgctttattggaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggaggtatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggtgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgctagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacccagccaaaaaacctcgatcaaatgctatgaagccaatgcg
gtgggtaagattgttgaatggatgtga
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