Helicobacter pylori Lithuania75: HPLT_01285
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Entry
HPLT_01285 CDS
T01896
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPLT_01285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hph03019
]
HPLT_01285
03009 Ribosome biogenesis [BR:
hph03009
]
HPLT_01285
Messenger RNA biogenesis [BR:
hph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPLT_01285
Ribosome biogenesis [BR:
hph03009
]
Prokaryotic type
rRNA helicases
HPLT_01285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_30
UvrD-helicase
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADU82699
UniProt:
E8QN03
LinkDB
All DBs
Position
247144..248619
Genome browser
AA seq
491 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPPSKKTQHEPAHSFKKSHHRDKHPK
TNRYSKKPKRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttatcataagcct
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggtttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacacaatagaggccctagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagatttttaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggtcagagcgttaaaaagcaatgtgaattcattaagaaaaacccccaagtg
atgatcgctacaccaggaaggctattggatcatttaaaaaacgaacgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactatctccctagcgaagcacagattttgcttttttcagcc
acgatgccagagccgattaaaagactagcggataagattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaac
gagcatgagagggctgaagcgatcatgcgccttttagacactcaagcacccaaaaagagc
atcgttttcacacgcaccaaaaaagaggccgatgaattgcatcagttccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgcgcttctatc
atggcgtttaaaaaaaatgatgctgatgtgttagtggctacagatgtggcgagccgtggg
ctagacattagcggtgtaagccatgtgttcaattaccacttgcccctaaacactgagagc
tatatccatcgcatcgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaaggaatcatcagcctttatgaacagcttactgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagtaaaattggcttgaaccag
caagagattgatgcgattcaaaaccctaaagaaaaaacgccaaagcccccaagcaaaaaa
acgcagcacgagccagcacactcttttaaaaagagccaccacagagacaaacaccccaaa
acgaatcgttattctaaaaaacccaaacgccgttaa
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