KEGG   Helicobacter pylori Lithuania75: HPLT_02595
Entry
HPLT_02595        CDS       T01896                                 
Name
(GenBank) cag pathogenicity island protein 5
  KO
K12090  cag pathogenicity island protein 5
Organism
hph  Helicobacter pylori Lithuania75
Module
hph_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hph00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hph02044]
    HPLT_02595
Secretion system [BR:hph02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPLT_02595
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind Membra_charge F59B103_C RIC3 MFS_1
Other DBs
NCBI-ProteinID: ADU82948
LinkDB
Position
complement(509278..511524)
AA seq 748 aa
MEDFLYNTLYFIEDYKLVVIFSFIGLIALFFLYKFIKAQKKAFKDKANQPQKKKSFKEII
IDGLKERVKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNRLPESDDDLFDIWIYAI
QDFPNYYFKALCFSSLKIYGFNISLVVYSSILCSYIFITFFVWFLKYLTRTRDIGANKKV
DDLFGSASWETEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPT
RSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNP
FAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFS
NQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNME
KVVSLMEFFGGEEDKSGDNLRALSPATRNMWNNFKTMGGAKETYSSVQGVYTSAFAPYNN
AMIRNFTSANDFDFRRLRIDEVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQ
CKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGRNGAKT
ILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLM
TPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQAT
FYDDLQAAKTRGELSYDKSLVPVGSSEL
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaagactttttgtataacaccttatatttcatagaggattataagttggttgttatt
tttagtttcataggattaatagcgttattttttctctacaaattcataaaagctcaaaaa
aaggcttttaaagataaagctaaccaacctcaaaagaaaaaaagctttaaagaaatcatt
atagatgggctgaaagaaagagttaaaacctttggtttttggttacaagctatactatta
ctatcctattcttttatcacatcagggttatttttcttgattctcttaggtaatttttat
gatgacaatcgattgcctgagagtgatgatgatctttttgatatatggatctatgcgata
caagattttcctaattactattttaaggcgctttgttttagttcactcaaaatttatggg
ttcaatatatccttagtcgtatatagttctattttatgctcttatatcttcattaccttt
tttgtgtggttcttaaaatacttaactcggactagagacataggagcgaataaaaaagtt
gacgatctctttggtagcgcgagttgggaaactgaagagaaaatgatcaaagctaaactt
atcacacccaataataaaaaacgcgcctttgacaaacgagaggttattgtaggtaggcgt
ggtttaggggattttatcgcttacgcagggcaggcgttcattggcttgattgctcccact
agaagcggtaagggggtgggtttcatcatgcccaatatgatcaattatcctcaaaatatc
gttgtgtttgaccctaaagctgacactatggaaacttgcggaaaaatcagagaaaaacga
ttcaaccaaaaagtgttcatctatgaacctttctccttaaaaacacaccgatttaatcct
ttcgcttatgtggattttggtaatgatgtggttttgaccgaagacatactctctcaaatt
gacacacgcctaaaagggcatggcatggtggctagtggaggggatttttccactcaaatc
tttggattggcaaagctcgtgttccctgaaagacctaatgaaaaagatcctttttttagc
aatcaagcgcgaaatctttttgtcatcaattgcaatatttatagggatctcatgtggact
aaaaaggggcttgagtttgtcaaaagaaaaaaaatcatcatgcctgaaacccccacgatg
tttttcataggttctatggcgagcggtatcaacttgattgatgaagacacaaacatggaa
aaagtcgtatctctgatggaattttttggaggtgaagaagataagagtggcgacaatcta
agagcgcttagtcctgctactagaaacatgtggaataacttcaaaacaatgggtggcgct
aaagaaacttacagctctgttcaaggggtctatacttcagcgtttgcgccttacaataac
gctatgattaggaatttcacgagcgctaatgattttgatttcaggcgtttgaggattgat
gaagtgagtattggcgtgatcgctaatcctaaagaaagcactattgttgggccgatatta
gagctgtttttcaatgtgatgatttatagcaaccttattctgccaatccatgatccacaa
tgcaaaagaagttgcttaatgcttatggatgaattcacgctctgtggctatttagagacc
tttgttaaagcggtagggattatggcagaatacaacatgcgccccgcttttgtgtttcaa
agtaaggcacaactagagaatgaccccccacttggttatggtaggaatggcgctaagact
attttagacaacctttctttgaatatgtattatgggattaacaacgataactactatgaa
cattttgaaaaactttctaaggtgttagggaaatacacaagacaagatgtgagccggagc
attgatgacaatacaggtaagaccaacacttctatcagcaacaaagagcggtttttgatg
acccctgatgaattgatgactatgggcgatgagcttatcattctagagaatacgctcaaa
cccatcaaatgccacaaggcactttactatgatgatccattcttcaccgatgaactcatt
aaggtgagtccaagcttgagcaagaaatacaaattggggaaagtgcctaatcaggcaaca
ttctatgatgatttgcaagccgctaaaactagaggtgaattgagctatgataaatcttta
gtgcctgtgggttcaagcgaactgtga

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