Entry |
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Name |
(GenBank) DNA gyrase subunit A
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KO |
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Organism |
hph Helicobacter pylori Lithuania75
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Brite |
KEGG Orthology (KO) [BR:hph00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:hph03032]
HPLT_03500
03400 DNA repair and recombination proteins [BR:hph03400]
HPLT_03500
Enzymes [BR:hph01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPLT_03500
DNA replication proteins [BR:hph03032]
Prokaryotic type
DNA Topoisomerases
HPLT_03500
DNA repair and recombination proteins [BR:hph03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPLT_03500
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
707352..709838
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AA seq |
828 aa
MQDRLVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRMDEIIDALVHVLENPNTGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSPSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIADLNGILRSEDRLNGVVKTELLEVKEQ
FSSPRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKVYEKQNRGGKGKLSGST
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAVVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKVVDKN
AKHLLIASHLGIFIKFPLEDVREMGRNARGVIGIRLNENDFVVGAVVISGDGNKLLSVSE
NGLGKQTLAEAYREQSRGGKGVIGMKLTQKTGNLVGVISVDDENLDLMILTASAKMIRVS
IKDIRETGRNASGVKLINTADKVVYVNSCPKEEEPENLETSSVQNLFE |
NT seq |
2487 nt +upstreamnt +downstreamnt
atgcaagatcgtttagtcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattccatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttccaaagtcgcttacaaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcacaagatttt
tctatgcgtttggaattagtggatgggcagggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagcca
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggatggatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacactggattagatgaaattttggaatttgtcaaagggcctgat
tttcccactggtgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgggccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctttacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcacgatttttgaattggaaaaggctaaggctagagcgcat
attttagagggctatttgatcgcactagacaatattgatgaaatcgtgcaactcattaaa
acaagcccaagcccagaagcggctaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcaacgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgctagagcttattgctgatctcaatggcatttta
aggagtgaagatcgcttgaatggagtcgtcaaaacagaacttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaagtttatgaaaatattgatatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagtttatgaaaagcaaaatcgtggcggtaagggaaagctttcaggcagcact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataaaatcccagaagcgagccgg
atcgctatgggtaaagccgttgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcaaccctaagcactaaagactttagcgatgaacgctctttagccttctttacgaaaaat
ggtgtggtgaagcgcactaatttgagcgaatttgggagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattagtgagcgcaaaagttgtggataaaaac
gctaagcatttgctcatcgcatcgcatttgggcattttcattaaattccctttagaagat
gtgcgcgagatgggaaggaatgctcgtggggttatagggattaggctgaatgaaaatgat
tttgttgtcggtgcggtcgttattagcggtgatggcaacaagcttttgagcgtgagtgaa
aacgggcttggcaagcaaactttagctgaagcgtatagagagcaatctcgtggaggtaag
ggggtcattggcatgaaactcactcaaaaaaccggtaatctagtgggcgttatcagcgta
gatgatgaaaatttggatttgatgatccttactgcaagcgcgaaaatgatcagagtttcc
attaaagacattagagaaaccggaagaaacgctagtggggtaaaactcataaacaccgct
gataaagtcgtgtatgtcaattcttgccctaaagaagaagagccagaaaatttagaaacc
tcttcggtgcaaaatttgtttgagtga |