Helicobacter pylori Lithuania75: HPLT_03590
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Entry
HPLT_03590 CDS
T01896
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03030
DNA replication
hph03430
Mismatch repair
hph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPLT_03590
03430 Mismatch repair
HPLT_03590
03440 Homologous recombination
HPLT_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hph03032
]
HPLT_03590
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_03590
Enzymes [BR:
hph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPLT_03590
DNA replication proteins [BR:
hph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPLT_03590
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPLT_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_30
EH_Signature
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADU83136
LinkDB
All DBs
Position
complement(726267..728006)
Genome browser
AA seq
579 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCETGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLKERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAPKQEPKSTERIEGTEKRENTEKIASVETPQTPMLSAKDRIFHNLFKQVQTLVYERN
YELGVVFEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFGKGENIKI
ALKNQNKSALEVVKEFKFPYSKPKPTTETTAEMKEKEIQKKEVQKNEIKEKETKENDTKE
IQEAQPKQAPTALQEFMANNSDLIEEIKSEFEIKSVELL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctggtcggtcaagag
agcgtggctaaaacgctttctttagccctggacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcgggtaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaaacagggccaaaggctgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccacatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccactgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaagtagcgcg
ttagaaaaactcgctcacagcggacaagggagcttgagagacacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgacagaagcgttttagaagatttttttcaaagcctgatcaatcaagatgaagcg
cgattaaaagagcgttatgccattttagaaaactatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattctatccttttgata
gagcgcttttttaaaatcattatgagtagtctcagtcttttgaaagaaggggctaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaaacccttaaatcaa
aacgctaacgcccctaaacaagaacccaaaagcacagaaagaatagagggaacagaaaaa
agagaaaacacagaaaaaatagcgagtgtagaaaccccacaaactcccatgctttcagct
aaagatcgcatttttcacaaccttttcaagcaagttcaaacattggtttatgagcgcaac
tacgaattaggggtggtgtttgaaaaaaatatccgtttcattgattttgacagccagact
aaaactttgacttgggagtctttagccactgataaggataaggagcttttaagagagcgt
tttaaaatcgtgaaaagtatcgttgatggggtttttggcaagggcgaaaatatcaaaatc
gctttaaaaaatcaaaataaaagcgctttagaagtggttaaagagtttaaattcccttat
tcaaagcccaagccaaccaccgaaaccacggctgaaatgaaagaaaaagagattcaaaaa
aaagaggttcaaaaaaacgagattaaagaaaaagaaactaaagaaaacgacactaaagag
attcaagaagcccaaccaaaacaagccccaacagccttgcaagaattcatggctaataat
tctgatcttattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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