Helicobacter pylori Lithuania75: HPLT_04630
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Entry
HPLT_04630 CDS
T01896
Name
(GenBank) Rep helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03420
Nucleotide excision repair
hph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPLT_04630
03430 Mismatch repair
HPLT_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_04630
Enzymes [BR:
hph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPLT_04630
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPLT_04630
MMR (mismatch excision repair)
Other MMR factors
HPLT_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
DGKD_4H
Motif
Other DBs
NCBI-ProteinID:
ADU83328
LinkDB
All DBs
Position
915877..917904
Genome browser
AA seq
675 aa
AA seq
DB search
MLETLQLNPEQLKAALASKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYFKSSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELRKLLESIVDTKN
AIDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSSKNPEHMPYAALYENILEEFENTKK
KHNYIDYNDLLLLFKKAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQ
SIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEVV
KSGKFNKPTLLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVPS
KRKGSASFFESKEVALALDICALLFNPKDIMAAIHILSYISDIGSNTAKDIHEALMLLGN
GDLKSALIQPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVMDKAFHSHPVLMHPKI
SLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKK
LQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSNEATQGCGVNLLSVHASKGLEFKDV
YIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKP
SVFLYEAGLLKPDLK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcaactaaaagcggctttagcttcaaaaggg
tataatttagtgattgcaagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgccagggtggctaaatattttaaatcaagctccaaaatt
gaagcgggcactttccatgcggtagcgtatcgctatttaaaagagcattaccctaattta
agcctaaagcaacctaaagaattgagaaaacttttagaaagcattgtggacactaaaaac
gccatagatgacgataaaaagccctacacttcgcagcatctctacgccctctattctctt
tacactaacgctttaaaacaagaagattttagcgcatggctttctagtaaaaaccctgaa
cacatgccatacgccgccctttatgaaaacattttagaagagtttgaaaacactaaaaaa
aagcataattacattgactataacgacttgctgctgctgtttaaaaaagcgatgctagaa
agacctagcccttataaagaagtgctttgcgatgaatttcaagacactaaccccttacaa
gaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgatcag
agcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaatac
aaaaacgcccaggttttcacgctcactaaaaactaccgctcttctaaagaaattttagat
ctcgccaatcaagtgatacagcataacgagcgcatttaccctaaaaatttagaagtggtg
aaatcagggaaattcaataaacccacgcttttaaattacaacgacaatatcgcgcaatgc
caagacatcgctaaacgcattgtcatgcgaaaaaattttaaagaagtggcggtgattttt
aggaacaacgccagcgcggatcaattagaagccgctttaagatcccacaatgtgccaagc
aaacgaaaagggagcgcgagcttttttgaatccaaagaagtggcgttagcgttagatatt
tgcgcgttattatttaaccctaaagacattatggcagccattcacattttaagctatatc
agcgatattggctctaacaccgctaaagacattcatgaagccttgatgcttttaggcaat
ggcgatctcaaatcagctttaattcagcctaataaagaagccaaaatttacacgaagaaa
aaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctcaagg
tttaatagcgtgatggataaggcgtttcattcgcacccagtattgatgcaccctaaaatc
tcactcaatggggctaaaatgcttagcgattttttcattctttataccaaagcccctacc
cattcccctagcgctttaatcaaacacattttagaaagcgcgttttttcaaacctttaaa
acacgccttttaaaagagcgctccaaaaataaggacggctcttataacgagtttaaaaaa
ctccaagcgcaaaaacgcttcaatgaaaaaatggatttgctgagttctttggcgaaaaat
taccaaaatttaggccgttttttaaacggcactttaataggctcaaatgaagccacgcaa
ggctgtggcgtgaatctattgagcgtgcatgcttctaaaggcttagaatttaaagatgtt
tatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggtggg
ggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaattta
tggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataaaccc
tcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa
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