Helicobacter pylori Lithuania75: HPLT_04640
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Entry
HPLT_04640 CDS
T01896
Name
(GenBank) Outer membrane porin and adhesin HopC; putative signal peptide
KO
K15843
outer membrane protein HopC/AlpA
Organism
hph
Helicobacter pylori Lithuania75
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
Motif
Other DBs
NCBI-ProteinID:
ADU83330
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All DBs
Position
918443..919999
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AA seq
518 aa
AA seq
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MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADV
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPMKLNSNDVSANALLSGAVGNGTCAAAG
TAGGTSLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVF
FNAMNKALEKNGTTSGTSSASGATGSNGQTYSQQAIQYLQGQQNILNNAANLLKQDELLL
EAFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQAVYNELTKNTISGSAVNNAGINSNQAN
AVQGRASQLPNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRSTNILNGFYTKIGYK
QFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDM
GFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHT
VEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagaatagaacgctgtttcttagtctagccctttgcgctagcataagttat
gccgaagatgatggagggtttttcaccgtcggttatcagcttgggcaagtcatgcaagat
gtccaaaacccaggcggcgctaaaagcgacgaactcgccagagagcttaacgctgatgta
acgaacaacattttaaacaacaacaccggaggcaatgtcgcaggggcgttgagtaacgct
ttctcccaatacctttattcgcttttaggggcgtatcccatgaaactcaatagtaacgat
gtgtctgcgaacgctcttttaagtggtgcggtaggcaatgggacttgtgcggctgcaggg
acggctggtggcacatctcttaacactcaaagcgcttgcaccgctgcgggctattactgg
ctccctagcttgactgataggattttaagcacgatcggcagccagactaactacggcacg
aacaccaatttccccaacatgcaacaacagctcacctacttgaacgcggggaatgtgttt
tttaacgcgatgaataaggctttagagaagaatgggactactagtggcactagtagcgct
agcggtgcgactggttcaaatggtcaaacttactcccaacaagccattcaataccttcaa
ggccaacaaaatatcttaaataacgcagcgaacttgctcaagcaagatgaattgctccta
gaagctttcaactctgccgtagccgccaacattgggaataaggaattcaattcagccgct
tttacaggtttggtgcaaggcattattgatcaatctcaagcggtttataacgagctcact
aaaaacaccattagcgggagcgcggttaataacgctgggataaactccaaccaagctaac
gctgtgcaagggcgtgctagtcagctccctaacgctctttataacgcgcaagtaactttg
gataaaatcaatgcgctcaacaatcaagtgagaagcatgccttacttgccccaattcaga
gccgggaacagccgttcaacgaatattttgaacgggttttacaccaaaataggctataag
caattcttcgggaagaaaagaaatatcggtttgcgctattatggtttcttttcttataac
ggagcgagcgtgggctttagatccactcaaaataatgtagggttatacacttatggggtg
gggactgatgtgttgtataacatctttagccgctcctatcaaaaccgctctgtggatatg
ggcttttttagcggtatccaattagccggtgagaccttccaatccacgctcagagatgat
cccaatgtgaaattgcatgggaaaatcaataacacgcacttccagttcctctttgacttc
ggtatgaggatgaacttcggtaagttggacgggaaatccaaccgccacaaccagcacacg
gtggaatttggcgtagtagtgcctacgatttataacacttattacaaatccgcagggact
accgtgaagtatttccgtccttatagcgtttattggtcttatgggtattcattctaa
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