Helicobacter pylori Lithuania75: HPLT_04705
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Entry
HPLT_04705 CDS
T01896
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hph
Helicobacter pylori Lithuania75
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hph03016
]
HPLT_04705 (truD)
Enzymes [BR:
hph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPLT_04705 (truD)
Transfer RNA biogenesis [BR:
hph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPLT_04705 (truD)
Prokaryotic type
HPLT_04705 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADU83343
LinkDB
All DBs
Position
941841..942986
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIARFGMPNYFGSQRFGKFNDNHKEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISTFSLKENLEFFKQKNLS
VDSNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLNKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcctctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagcaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaaatcctgtctttgaattaccat
cataataaaatcaaattagggcatttaaaagggaatcgcttttttatgcgttttaaaaaa
atgacccctctaaacgctcaaaaaacagagcaggttttagaacaaatcgcacggtttggc
atgcctaattattttggttcgcagcgcttcgggaagttcaatgacaaccataaagaaggg
ttaaaaatcttgcaaaatcaaacgaaatttgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcacttttagcctaaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttgattcaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcctagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gaaagcgaaaggtttttaaacaaagaagctgcgcctacgggcttattagacggcaaaaaa
gccctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
aatagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaatata
acttctcaatacgtaaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcaagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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