Helicobacter pylori Lithuania75: HPLT_06230
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Entry
HPLT_06230 CDS
T01896
Name
(GenBank) outer membrane protein BabA
KO
K15847
outer membrane protein BabA
Organism
hph
Helicobacter pylori Lithuania75
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
Motif
Other DBs
NCBI-ProteinID:
ADU83636
LinkDB
All DBs
Position
complement(1246798..1249032)
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AA seq
744 aa
AA seq
DB search
MKKHILSLTLGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVKNTKGIQQLSDNYENLSKLL
NRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVV
GYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGHTPGYYGPMSIENFKKLNEAY
QILQTALKKGLPALKENNGTVSVTYTYTCSGEGNNNCSPNVTGVSKQNGGTKTETQTIDG
KTVNTTISSKVVDSTAEGNTSKVSYTEITNKLDGVPDSAQALLAQASTLINTINMACPYF
HANNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGN
NGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGNFKNFVTGFLATCNN
PSTAGTSGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
VNFKSRYSELGNTYSSITTALSSVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQI
QTINQELGRNPFRKVGIVGSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEY
VNLATVNNVYNAKINTANFQFLFNLGLRMNLARSKKKGSDHAAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacatcctttcattaactttaggctcgcttttagtttccactttgagtgct
gaagacgacggcttttacacaagcgtaggctatcaaatcggtgaagccgctcaaatggtg
aaaaacaccaaaggcatccaacagctttcagacaattatgaaaacttgagcaagcttttg
aatagatacagcaccctaaacacccttatcaaattgtccgctgatccgagcgcgatcaac
gcggctcgtgaaaatctgggcgcgagcgcgaagaacttgatcggcgataaagccaattcc
cccgcctatcaagccgtgcttttagcgatcaacgcggcggtagggttttggaatgtcgta
ggctatgtgacgcaatgcgggggtaatgccaatggtcaaaaaagcacctcttcaaccacc
atcttcaacaacgagccagggtatcgatccacttccatcacttgttctttgaacggacat
acgcctggatactacggccctatgagtattgagaattttaaaaagcttaacgaagcctac
cagatcctccaaacggctttaaagaaaggcttacccgcgctcaaagaaaacaacgggacg
gtcagtgtaacctatacttacacatgctcaggggaagggaataataactgctcgccaaac
gtcacaggtgtaagcaagcaaaatggcggaaccaagactgaaacccaaaccatagacggc
aaaaccgtgaataccacgatcagttcaaaagtcgttgatagcacagcagagggtaataca
tcaaaggtatcctacaccgaaatcactaacaaattagacggtgtgcctgatagcgctcaa
gcgctcttagcgcaagcgagcacgctcatcaacaccatcaacatggcatgcccgtatttc
catgctaataatagtagtgaggctaacgccccaaaattctctactactactgggaaaata
tgcggcgctttttcagaagaaatcagcgcgatccaaaagatgatcacagacgcgcaagag
ctggtcaatcaaacgagcgtcattaacgagcatgaacaatcaaccccggtaggcggtaat
aacggcaagcctttcaaccctttcacagacgctagctttgcgcaaggcatgctcgctaac
gctagcgcgcaagccaaaatgctcaatttagcccatcaggtggggcaaaccattaaccct
gacaatcttaccgggaattttaaaaattttgttacaggctttttagccacatgcaacaac
ccctcaacagctggcactagcggcacacaaggttcagctcctggcacagttaccactcaa
actttcgcttccggttgcgcctatgtggaacaaaccataacgaatttaaccaacagcatc
gcgcattttggcactcaagagcagcaaatacagcaagctgaaaacatcgctgacactcta
gtgaatttcaaatctagatacagcgaattgggcaacacttatagtagcatcactaccgca
ctctctagtgtccctaacgcgcaaagcttgcaaaatgtggtgagtaaaaagaacaacccc
tacagcccgcaaggcatagaaaccaattactacttgaatcaaaattcttacaaccaaatc
caaaccatcaaccaagaattaggacgaaacccctttaggaaagtgggcatcgtcggctct
caaaccaacaatggtgccatgaatgggatcggtattcaagtaggctacaaacaattcttt
ggccaaaaaagaaaatggggcgctaggtattacggcttttttgattacaaccatgcgttc
attaaatccagctttttcaactcggcttctgatgtatggacttatggttttggagcggac
gctctctataacttcatcaacgataaagccaccaatttcttaggcaaaaacaacaagctt
tccgtagggctttttggagggattgcgttagcggggacttcatggctcaattctgagtat
gtgaatttagccaccgtgaataatgtctataacgctaagatcaacaccgctaatttccaa
tttttattcaatttaggcttgagaatgaatctcgctagatctaagaaaaaaggcagcgat
catgccgctcagcatggcattgagctaggcgtgaaaatccccaccattaacaccaattac
tattctttcatgggggctgaactcaaatacagaaggctttatagcgtgtatttgaattat
gtgttcgcttactaa
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