Helicobacter pylori Lithuania75: HPLT_06490
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Entry
HPLT_06490 CDS
T01896
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPLT_06490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hph03021
]
HPLT_06490
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_06490
Enzymes [BR:
hph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPLT_06490
Transcription machinery [BR:
hph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPLT_06490
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPLT_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
ADU83688
LinkDB
All DBs
Position
complement(1296008..1297042)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgcttgct
catcctattagaagactcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtgcatcatgagtttgactctttaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagctaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcatatagaaatcgtcaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccgctagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgatccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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integrated database retrieval system
