Helicobacter pylori Lithuania75: HPLT_07355
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Entry
HPLT_07355 CDS
T01896
Name
(GenBank) DNA helicase II (uvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hph
Helicobacter pylori Lithuania75
Pathway
hph03420
Nucleotide excision repair
hph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPLT_07355
03430 Mismatch repair
HPLT_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hph03400
]
HPLT_07355
Enzymes [BR:
hph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPLT_07355
DNA repair and recombination proteins [BR:
hph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPLT_07355
MMR (mismatch excision repair)
Other MMR factors
HPLT_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ADU83856
LinkDB
All DBs
Position
complement(1452005..1454053)
Genome browser
AA seq
682 aa
AA seq
DB search
MMDFEKSILGNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTL
TLTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSD
EVKTLCKQLKISSFRASISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLLL
SLKILQNNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYG
FRGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSH
KSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYR
LIGALSFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGL
NLEEALKLGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEK
EDNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDVHNTENAQKVSCMSVHMSKG
LEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKI
SCSPSVFLEEAKLLQQEKPPKQNHQKNTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKI
NCGGNVYDKISEKFVEKVDNGF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgaaaaaagcattttaggcaatttaaacggagcgcaaaaaatcgctgca
agccacattcaagggccattgctcattttagcgggagctgggagcggtaagactaagact
ttaacgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacacttta
acgctcacttttaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttg
aaaaaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttt
ttaaggcaacacatgaatcttttaaaaagagcgtgcgatttttcggtgctagatagcgat
gaagtcaaaacgctgtgtaagcagctcaaaatttcaagctttagagccagtatttctcaa
atcaaaaacggcatgatggatttgagcatgcaagatagcgaatgttataaagcgtatgag
ctttatcaaaacgcgcttaaaaaagacaatttagtggattttgacgatttgcttttgcta
agccttaagattttacaaaataatgaaaccatcgccaaagaaactagcgagcgctaccat
tacattatggtagatgagtatcaagacacgaacgccctgcaattagaatttttaaaaaaa
ttgagtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggt
tttaggggggcggatatttctaatattttaaatttttccaagcattttaaaggggctaag
gtggtgaaattagagaccaactaccgctctagcgctgaaattttagcgtgcgctaattct
ttgattagccataaccaacaccgccatattaaaacgcttcaaagttttaaaggctcgcat
aaaagcgtggtttgtaaagaatatttgacgcaaaaagaagagagtttggatgtggcttat
caaatcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtaccgc
ttaaacgggcttagccgcagcattgaagagagtttgaacgctttgaatattccctatagg
cttattggggcgctgagtttttatgaaagagccgaggttaaagacgctttggcgttcatg
catttagtggcgaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccccca
agaggccttggcaagatcactcaagaatggattttttctcttttagatgaagagggtttg
aatttagaagaggcgttaaaacttggggcgtttaaagacaaactaaaccctaaaaacgaa
tacgctttaaagaaattcaccgctatgatagggcgattgagggaggcttttgaaatttca
gtagagaagttttgcgagcggtttttagaagagaccaaccttttaaaaagctatgaaaaa
gaagacaattacgaagaaagggagggttttgttaaagagcttttaagtttagtgaaagag
cattttaaaactaaccccacgcattctttgctggattttttgaatgaaagcgtgttagat
gtccataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggc
ttagagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggg
ttcaatcaagaaagcgatttggaagaagaaaggcgcttggcttacgtagcgatcactagg
gctaaagaagaattgcaactttcttatgtgaaagagcgttcgtattttgggaggaaaatt
tcttgctcgccctctgtgtttttagaagaagccaagttgctccaacaagaaaaaccccct
aaacaaaatcaccaaaaaaacacgcccattaaagtgggggatttgatcaagcataagatt
tttggcactgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatc
aattgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataac
gggttttga
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