Halomonas sp. H5: ACQ1W9_08600
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Entry
ACQ1W9_08600 CDS
T11362
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hphz Halomonas sp. H5
Pathway
hphz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hphz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQ1W9_08600 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hphz03019
]
ACQ1W9_08600 (groL)
03110 Chaperones and folding catalysts [BR:
hphz03110
]
ACQ1W9_08600 (groL)
03029 Mitochondrial biogenesis [BR:
hphz03029
]
ACQ1W9_08600 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hphz04147
]
ACQ1W9_08600 (groL)
Enzymes [BR:
hphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACQ1W9_08600 (groL)
Messenger RNA biogenesis [BR:
hphz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACQ1W9_08600 (groL)
Chaperones and folding catalysts [BR:
hphz03110
]
Heat shock proteins
HSP60 / Chaperonin
ACQ1W9_08600 (groL)
Mitochondrial biogenesis [BR:
hphz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACQ1W9_08600 (groL)
Exosome [BR:
hphz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACQ1W9_08600 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACQ1W9_08600 (groL)
Exosomal proteins of breast cancer cells
ACQ1W9_08600 (groL)
Exosomal proteins of colorectal cancer cells
ACQ1W9_08600 (groL)
Exosomal proteins of bladder cancer cells
ACQ1W9_08600 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XUK19941
LinkDB
All DBs
Position
complement(1853809..1855446)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKQVKFSDDARKRMARGVDVLANAVKATLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDRFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIINEGLKGVTAGMNPMDLKRGI
DKAVIAAVKEIQALAVPCTDSKAIAQVGTISANGDARIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMAVELEDPFLLLVDKKISNIRELLPVLEAV
AKAGKPLVIIAEDIEGEALATLVVNTMRGIVKVAAAKAPGFGDRRKAMLQDIAILTNGTV
ISEEVGLNLEQATLDHLGSAKRVTMSKENTTIIDGAGAEGDIEARVNQIRAQIEETSSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVLTKVAGLSGDNDDQTHGINMALRAMEAPLRQIVTNAGEEASVVINRVKDGEGNFGYNA
QTGEFGDLFEMGVLDPAKVTRSALQSAGSVAGLMVTTECMVADDPEEKEAAAPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaacaggtcaagttttccgacgacgcccgtaagcgcatggctcgtggcgtg
gatgtcctcgccaacgccgtgaaggccaccctggggcccaagggccgcaacgtggtgctg
gagaagtccttcggcgcccccaccgtcaccaaggacggcgtctccgtggccaaggaaatc
gaactgaaggacaggttcgagaacatgggcgcccagatggtcaaggaagtcgcttccaag
acctccgacgtggccggtgacggcaccaccaccgccaccgtgctggcccaggccatcatc
aatgagggcctgaagggcgtgaccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtgatcgccgcggtcaaggagatccaggccctggccgtgccctgcaccgac
tccaaggcgatcgcccaggtcggcaccatctccgccaacggcgacgcccgcatcggcgag
atcatcgccgaggccatggagaaggtcggcaaggaaggcgtgatcaccgtcgacgagggt
cgtggcttcgaggacgagctggaagtcgtggaaggcatgcagttcgaccgcggctacctc
tccccgtacttcgtcaccaaccaggacaccatggccgtcgagctggaagatcccttcctg
ctgctggtggacaagaagatctccaacatccgcgaactgctgccggtgctggaagccgtc
gccaaggccggcaagccgctggtgatcatcgccgaggacatcgaaggcgaggccctggcc
accctggtagtcaacaccatgcgcggtatcgtcaaggtcgccgccgccaaggcgccgggc
ttcggtgatcgtcgcaaggcgatgctgcaggatatcgccatcctgaccaacggcaccgtg
atctccgaggaagtcggcctgaacctcgagcaggccaccctggaccacctgggcagcgcc
aagcgcgtgaccatgtccaaggagaacaccaccatcatcgacggcgccggtgccgagggc
gatatcgaggcccgcgtcaaccagatccgcgcccagatcgaggagacctcctccgactac
gatcgtgagaagctccaggagcgcgtcgccaagctggccggcggtgtcgccgtgatccgc
gtcggtgccgccaccgaagtggagatgaaggagaagaaggcccgcgtcgaggacgccctg
cactccacccgcgccgccgtcgaggaaggcgtggtgcctggtggcggtaccgccctggtc
cgcgtgctgaccaaggtggccggcctgagcggcgacaacgacgaccagacccacggcatc
aacatggccctgcgcgccatggaagccccgctgcgtcagatcgtcaccaacgccggcgaa
gaggcctccgtggtcatcaaccgcgtcaaggatggcgagggtaacttcggttacaacgcc
cagaccggcgagttcggcgacctcttcgagatgggcgtgctggatccggccaaggtgacc
cgttctgccctgcagtccgccggttccgtggctggcctgatggtcaccaccgagtgcatg
gtggccgacgatccggaagagaaggaagccgccgctccggatatgggcggcatgggtggc
atgggcggcatgatgtag
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