KEGG   Halomonas sp. H5: ACQ1W9_10090
Entry
ACQ1W9_10090      CDS       T11362                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
hphz  Halomonas sp. H5
Pathway
hphz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hphz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACQ1W9_10090 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hphz03400]
    ACQ1W9_10090 (uvrB)
DNA repair and recombination proteins [BR:hphz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACQ1W9_10090 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACQ1W9_10090 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 UB2H AAA_5 Kinesin
Other DBs
NCBI-ProteinID: XUK16561
LinkDB
Position
complement(2151509..2153536)
AA seq 675 aa
MSKPFRLASKFQPAGDQPAAIDGLVGGLEAGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIHQRDFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADAEDEAVRVELFDDEIDSIRLFDPLTGEVRGQVPR
MTIYPKSHYVTPRETILEATESIKAELVERLDWLRKHDKLVEAQRLEQRTHYDLEMMLEL
GYCNGIENYSRYLSGRNPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWERISPQTIFVSATPGNYEAEHAGQVVEQVVRPTGLVDP
QIEVRPASTQVDDLLSEIHLRTAVGERVLVTTLTKRMAEDLTDYLDEHGVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKALLYGDRITDSMRRAMDETERRRAKQLAHNAEHGITPQTVTRSVADILEAAQ
APGKKGSRRRGERKVAEPQGIYDPAALSPEALVKEVSRLEDAMFEAAQNLEFEEAARLRD
RLHELKERQLALGAV
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgagcaagccctttcgactggcatccaagttccagcccgccggcgatcagcccgcggcc
atcgatggactggtcggggggctggaggcggggctcgcgcatcagacgctgctgggggtg
accggctccggcaagaccttcaccatggccaatgtggtggagcggttgcagcgtccgacc
atcgtcatggcgcccaacaagaccctggcggcccagctctacggtgaattcaaggccttc
ttccccgataacgccgtcgagtacttcgtctcctactacgactattaccagcccgaggcc
tatgtgcccgcctcggacacctttatcgagaaggacgcctcgatcaacgaccatatcgag
cagatgcgcctctccgccaccaaggcgctgctggagcggcgcgatgccctgatcgtggtc
tcggtgtcggccatctacggcctgggggatcccgaccagtacctcaagatgcgcctgcac
ttcacccgcggcgagctgattcatcagcgcgacttcctgcgccgcctggccgagctgcag
tacacccgcaacgacatggacttccgccgcggcacctaccgggtgcgcggcgatgtgatc
gatatcttcccggcggacgccgaggacgaggcggtgcgggtggagctcttcgatgacgag
atcgactccattcgcctcttcgatcccctgaccggcgaggtgcgggggcaggtgccgcgt
atgaccatctaccccaagagccactatgtgacgccccgggagaccattctcgaggccacc
gagtcgatcaaggcggagctcgtggagcgcctcgactggttgcgcaagcacgacaagctg
gtggaggcgcagcgcctggagcagcgcacccactatgacctggagatgatgctggagctg
ggctactgcaacggcatcgagaactactcccgctacctctccgggcgcaatcccggggag
ccgccgcccaccttcttcgactacctgccggacgatgcgctgctgtttatcgacgagagt
cacgtcagcgttccccaggtggggggcatgtacaagggcgaccgttcccgcaaggagacc
ctggtggagtacggcttccgcctgccctcggccctggacaatcgccccatgaaattcgag
gagtgggagcggatctccccccagaccatcttcgtctccgccacgccgggcaactatgag
gcggagcacgccggccaggtggtcgagcaggtggtgcgccccaccggcctggtcgacccg
cagatcgaggtgcgcccggcctccacccaggtggatgacctgctctcggagattcacctg
cgcaccgcggtgggggagcgggtgctggtgaccaccctgaccaagcgcatggcggaggac
ctcaccgactacctggacgagcacggcgtgcgggtgcgctacctgcactcggatatcgat
accgtggagcgggtcgaaatcatccgcgacctgcgcctcggcgaattcgacgtgctggtg
gggatcaacctgctgcgcgagggcctggatattcccgaggtctccttggtggcgatcctc
gatgcggacaaggagggcttcctgcgcgccgaacgctcgctgatccagaccatcggccgg
gcggcgcgcaacgccaacggcaaggcgctgctgtatggcgatcgcatcaccgactccatg
cgccgcgccatggacgagaccgagcggcgccgggcgaagcagctggcccataacgcagag
cacggtatcaccccgcagacggtgacccggtcggtggccgatatcctcgaggcggcccag
gcaccgggcaagaagggcagccgccgacgcggcgagcgcaaggtggccgaaccccagggt
atctacgatccggcggcactgtctcccgaggccttggtcaaggaggtgtctcgcctggag
gacgccatgttcgaggcggcccagaacctggagttcgaggaggcggcgcggctgcgcgac
cgtctccatgagctgaaggagcggcaattggcgctgggcgcggtctag

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