Halomonas sp. H5: ACQ1W9_14360
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Entry
ACQ1W9_14360 CDS
T11362
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
hphz Halomonas sp. H5
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Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
nSTAND_NTPase5
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
XUK17370
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Position
complement(3107410..3110919)
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AA seq
1169 aa
AA seq
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MKALFSIVRQRWFLGLIGVVLLALLIWYIGPYIAIGAFVPLHSPWVRLGVIFVLFAGWGL
LQWLRARRVKRASERLGDAIVATAGSEDRRSDELGRRFEEAIGFLRESGKGKDLYRLPWY
VIIGPPGSGKTTALRHSGLTFPLDQKYGRDALRGVGGTRNCDWWFTDEAVLLDTAGRYFS
QDSSAGSDATEWQAFLDLMRKYRKRRPVNGVLVALSATDLLDPSPEARERHADMVRRRID
ELQRQLGIQVPVYFMVTKCDLIAGFVEFFDDLDHEGRLQVWGMTRPEPVAGGRPSEWLEG
EYARLLERLDARLLERLVEEREPQRRARLFGFPRQMAGLRESLLQFVADTFEGSGYDRPV
MLRGLYFTSGTQEGTPIDRMMDSLTRVYGMQVSGASPVEAAPGGQGRSYFIHRLLKAVIF
PESGLAGVNWRLEVGRALAQNVAYLVLLGVLGIVVAGWVTSYQYNRGYLADVGAALEAHA
ETATRPVPGEAGLAEVLPRLDALRDVATEANRHRGRVPFLMGLGLYRGEAVGTSADQAYL
QGVRELLVPRVVKLIERRLSTPNVSPTDVYAYLKGYLMLADTERLNRDELDVIVRETLLR
EYPQQRAIAQALFEHFSAYTDSARSFPAVGVDEELVARGRASLRQASVPALMLRRLETRY
DQRHEEALRLDVEAGLGSDLAFRRRSDTPLSEPVPALYTHAGFEQITGQEGGDLVSRFLE
ERWVFGEATLPGGRAAHLTLAEDFVRYYEEAYIDHWEALLDDLDLVPLLQVDQAIDLLAV
ITGPTSPLRRLMETIAAQTRFPAPEAEGEGEGEDEAQGGRLDAFLGFVDPGREEEPQEAA
VHPGARIDAHFQEFHRFVLGENGEPPMESLIARLTQLYQELSALGGGLGNQDAMQLLGGA
GGETLRRLSSEAARAPAPFNEWVDELAGSGQEVAMRNLRGQLNRRYRDAVLPICQELAQG
RYPFAPGSAEDIPPGDFARLFAPGGVMDAFFQENLASLVDAPGGRFQWRSDEAARVGIPS
SVLAQFQRAQMIREMFFVGGAGPRVAFSMTPRYLDARARQFQFATGEQILSYRHGPPLAR
RFVWPGDGGQDTAVMFEDRGGQRPNVAYSGSWSWLRAFDAAQPAAQSDTAYLVSFNVSGY
SARVLVQFESSRNPLRNNDWRRFRCAAGL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccctgttctcgatagtccggcaacgctggttcctgggcctgatcggggtggtg
ctgctggcgctgctgatctggtacatcgggccctatatcgccatcggtgccttcgtgccc
ctgcacagcccctgggtgcggctgggcgtcatcttcgtgctgttcgcgggctggggcctg
ctgcagtggctgcgcgcgcggcgcgtcaagcgggccagcgagcggttgggcgacgccatc
gtcgccacggccgggtcggaagaccgccgcagcgatgagctgggacgacgcttcgaggag
gccatcggcttcctgcgcgagtccggcaagggcaaggatctctatcggttgccctggtac
gtgatcatcggcccccccggttcgggaaagaccacggcgctgcgtcactccggactgacc
ttcccactcgatcagaagtacggccgggacgcccttcgcggcgtgggcggcacgcgtaac
tgcgactggtggttcaccgacgaggcggtgctgctggacaccgccgggcggtacttcagc
caggattccagcgccggctccgatgccaccgagtggcaggcgtttctcgacctgatgcgc
aagtatcgcaagcgccgtcccgtcaacggcgtgctggtggcgctgagcgccaccgacctg
ctcgacccttccccggaggcccgcgaacgccacgccgacatggtgcgtcgccggatcgac
gagctgcagcgtcagctgggcatccaggtcccggtgtacttcatggtcaccaagtgcgac
ctgattgccggcttcgtggagttcttcgatgacctggatcacgaggggcggctgcaggtc
tggggcatgacccgaccggagccggtggccggtgggcggccgagcgagtggctcgagggg
gagtatgcccggctgctggagcgcctggacgcccgcctgctggagcggttggtcgaagag
cgggagcctcagcggcgcgcccggctgttcggcttcccccgacagatggccggcttgcgg
gagagcctgctgcagttcgtcgccgataccttcgaggggtccggctacgaccggccggtg
atgctgcggggcctctacttcaccagtggcacccaggaaggcacgcccatcgaccgcatg
atggacagcctgacccgggtctacgggatgcaggtgtcgggcgcgtctcccgtcgaggcc
gcgccggggggccaggggcgcagctatttcattcatcgcctgctcaaggcggtgatcttc
ccggagtcggggctggccggcgtcaactggcgcctggaggtgggccgggccctggcccag
aacgtcgcctatctggtcctgctcggcgtgctcggcatcgtggtggcgggctgggtgacc
agttatcagtacaaccgcggctacctggcggacgtgggcgccgcactggaggctcatgcc
gaaacggccacccggccggtcccgggggaggccgggctggcggaggtgctaccgcgcctg
gatgccctgcgcgacgtggcgacggaagccaatcgccatcgggggagggtgcccttcctg
atgggcctggggctctatcgcggggaggccgtggggacctccgccgaccaggcctatctc
cagggcgtgcgcgaattgctggtgccacgggtggtgaagctcatcgagcggcggctgtcg
acgcccaatgtgtcgcccaccgacgtctatgcctacctcaagggctatctgatgctggcg
gataccgagcgcctgaatcgcgacgagctcgatgtcatcgtccgcgagacgctgctgcgc
gaatacccgcagcagcgcgccatcgcccaggcgttgttcgagcacttcagcgcctacacg
gacagtgcgcgctccttcccggcggtcggtgtcgatgaggaactggtagcccgcggccgc
gcctcgctgcgtcaggcctccgtgccggccttgatgctgcgtcggctggagacccgctac
gaccagcgccacgaggaggccctgcggctcgatgtggaggccgggctcggcagcgacctg
gcattccgccggcgcagcgacacgccgctgtcggagcccgttccggcgctctacacccat
gccggcttcgagcagatcactggccaggaggggggcgacctggtgagccgcttcctcgag
gagcgctgggtgttcggggaggcgacgctccccggcggtcgggcggcccatctgaccctg
gctgaggacttcgtccgctattacgaagaggcctatatcgaccactgggaggccctgctg
gacgacctggacctggtgcccttgctgcaggtggaccaggcgatcgacctgctggcggtc
atcaccggcccgacctcgccgctgcgccgcctgatggagacgatcgccgcccagacccgt
ttcccggcaccggaggccgagggcgagggcgagggcgaggacgaggcgcagggcgggcga
ctcgacgccttcctgggcttcgtcgatccgggacgcgaggaagagccgcaggaagcggcc
gtgcatccgggcgcgcgcatcgatgcccacttccaggagttccaccgcttcgtgctggga
gaaaacggcgaaccaccgatggaatcgctgatcgcccgcctgacccagctctatcaggag
ctcagtgccctgggcggcgggttgggcaaccaggacgccatgcagctgctgggcggggcc
gggggcgagacgttgcgtcgcctgagtagtgaggcggcccgcgcgccggcaccgttcaac
gagtgggtggatgaactggccggttcggggcaggaagtcgccatgcgcaacctgcgcggt
caactcaatcggcgctatcgcgatgccgtgctgcccatctgccaagagctggcgcagggt
cgctaccccttcgcccccggcagtgccgaggatattccccccggcgacttcgcccggttg
ttcgcccccggcggggtgatggacgccttcttccaggagaacctcgccagtctggtggat
gcgcccggggggcgcttccagtggcgtagcgacgaggccgcccgcgtgggcattccgtcc
tcggtactggcccagttccagcgtgcccagatgatccgtgagatgttcttcgtcgggggc
gcggggccgcgggtggccttctcgatgacaccgcgctatctggatgcccgggcgcggcag
ttccagttcgccacgggcgagcagatattgagctaccggcatgggccgcccctggcccgg
cgcttcgtctggccgggcgacggcggccaggacacggcggtgatgttcgaggaccgtggc
ggacagcggcccaatgtcgcctattccggtagctggtcctggttgcgtgccttcgatgct
gcccagccggcggcgcaatcggatacggcctacctggtcagtttcaacgtgagcggctat
tccgcccgggtgctggtgcagttcgaatcctcgcgcaatccactgcgcaacaatgactgg
cggcgcttccgttgcgccgcgggattgtaa
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