Helicobacter pylori 908: hp908_0550 Help Entry hp908_0550        CDS       T01893                                  Symbol cagA Name (GenBank) cag island protein   KO K15842   cytotoxicity-associated immunodominant antigen Organism hpi  Helicobacter pylori 908 Module hpi_M00564   Helicobacter pylori pathogenicity signature, cagA pathogenicity island SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CagA_N CagA DUF5659 Motif Other DBs NCBI-ProteinID:  ADN79679 LinkDB All DBs Position 529114..532668 Genome browser AA seq 1184 aa AA seqDB search MTNETIDQQPQTEAAFNPQQFINNLQVAFLKVDNAIASFDPDQKPIVDKNDRDNRQAFDG ISQLREEYSNKAIKNPTKKNQYFSDFINKSSDLINKDNLIDVESSTKSFQKFGDQRYRIF TSWVSHQNDPSKINTRSIRNFMEHAIQPPIPDDKEKAEFLKSAKQSFAGIIIGNQIRTDQ KFMGVFDESLKERQEAEKNGGSTGGDWLDIFLSFIFDKKQSSDVKEAINQEPVPHVQPDI ATSTTHIQGLPPESRDLLDERGNFSKFTLGDMEMLDVEGVADMDPNYKFNQLLIHNNALS SVLMGSHDGIEPEKVSLLYAGNGGFGDKHDWNATVGYKDQQGNNVATIINVHMKNGSGLI IAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIQNKIDFMEFLAQNNAKLDSLSEKEKEK FKNEIKDFQKDSKPYLDALGNDRIAFVSKKDPKHSALITEFNKGDLSYTLKDYGKKADKA LDREKNVTLQGNLKHDGVMFVNYSNFKYTNASKSPNKGVGVTNGVSHLEAGFSKVAVFNL PNLNNLAITSVVRRDLEDKLIAKGLSPQEANKLVKDFLSSNKELVGKALNFNKAVAEAKN TGNYDEVKRAQKDLEKSLKKREHLEKDVAKNLESKSGNKNKMEVKSQANSQKDEIFALIN KEANRDARAIAYAQNLKDIKRELSDKLENISKDLKDFSKSFDEFKNGKSKDFSKVEETLK ALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSIKDVIINQKI TDKVDNLNQAVSMAKIAGNFSGVEQALADLKNFSKEQLAQQAQKNESFNVGKSEIYQSVK NGVNGTLVGNGLSGIEATALAKNFSDIKKELNEKFKNFNNNNNGLKNGKDKGPEEPIYAQ VNKKKTGQVASPEEPIYAQVAKKVTQKIDQLNQAASGFGGVGQAGFPLKRHDKVEDLSKV GRSVSPEPIYATIDDLGGSFPLRRSAAVDDLSKVGRSREQELTQKIDNLSQAVSEAKAGF FGNLERTIDKLKDSTKNNPVNLWAENAKKVPASLSAKLDNYATNSHTRINSNIQNGAINE KATGMLTQKNPEWLKLVNDKIVAHNVGSVPLSEYDKIGFNQKNMKDYSDSFKFSTKLNNA VKDVKSGFTQFLANAFSTGYYSLARENAEHGIKNANTKGGFQKS NT seq 3555 nt NT seq  +upstreamnt  +downstreamnt atgactaacgaaactattgaccaacaaccacaaaccgaagcggcttttaacccgcagcaa tttatcaataatcttcaagtagcttttcttaaggttgataacgctatcgcttcattcgat cctgatcaaaaaccaatcgttgataagaacgatagggataacaggcaagcttttgatgga atctcgcaattaagggaagaatactccaataaagcgatcaaaaatcctaccaaaaagaat cagtatttttcagacttcatcaataagagcagtgatttaatcaacaaagacaatctcatt gatgtagaatcttccacaaagagctttcagaaatttggggatcagcgttaccgaattttc acaagttgggtgtcccatcaaaacgatccgtctaaaatcaacacccgatcgatccgaaat tttatggaacatgccatacaaccccctatccctgatgacaaagaaaaagcagagtttttg aaatctgccaaacaatcttttgcaggaatcatcatagggaatcaaatccgaacggatcaa aagttcatgggcgtgtttgatgaatccttgaaagaaaggcaagaagcggaaaaaaatgga gggtctactggtggggattggttggatatttttttatcatttatatttgacaaaaaacaa tcttctgatgtcaaagaagcgatcaatcaagaaccagttcctcatgtccaaccagatata gccactagcaccactcacatacaaggcttaccgcctgaatctagggatttgcttgatgaa aggggtaatttttctaaattcactcttggcgatatggaaatgttagacgttgagggcgtc gctgacatggatcctaattacaagttcaatcaattattgattcacaataacgctctgtct tctgtgttaatggggagtcatgatggcatagaacctgaaaaagtttcattattgtatgcg ggcaatggtggttttggagacaagcacgattggaacgccaccgttggttataaagaccaa caaggtaacaatgtggctacaataattaatgtgcatatgaaaaacggcagtggcttaatc atagcaggtggtgagaaagggattaacaaccctagtttttatctctacaaagaagaccaa ctcacaggctcacaacgagcattaagtcaagaagagatccaaaacaaaatagatttcatg gaatttcttgcacaaaacaatgctaaattagacagcttgagcgagaaagagaaagaaaaa ttcaaaaatgagattaaggatttccaaaaagactctaagccttatttagacgccctaggg aatgatcgtattgcttttgtttctaaaaaagacccaaaacattcagctttaattactgag tttaataagggggatttgagctacactctcaaagattatgggaaaaaagcagataaagct ttagatagggagaaaaatgtcactctccaaggtaacctaaaacatgatggcgtgatgttt gttaattattctaatttcaaatacaccaacgcctccaagagtcccaataagggtgtaggc gttacgaatggcgtttcccatttagaagcaggctttagcaaggtagctgtctttaatttg cctaatttaaataatctcgctatcactagtgtcgtaaggcgggatttagaggataaacta atcgctaaaggattgtccccacaagaagctaataagcttgtcaaagattttttgagcagc aacaaagaattggttggaaaagctttaaacttcaataaagctgtagctgaagctaaaaac acaggcaactatgacgaggtgaaacgagctcagaaagatcttgaaaaatctctaaagaaa cgagagcatttggagaaagatgtagcgaaaaatttggagagcaaaagcggcaataaaaat aaaatggaagtaaaatctcaagctaacagccaaaaagatgagatttttgcgttgatcaat aaagaggctaatagggatgcaagagcaatcgcttacgctcaaaatcttaaagacatcaaa agggaattgtctgataaacttgaaaatatcagcaaggatttgaaagactttagtaaatct tttgatgaattcaaaaatggcaaaagtaaggatttcagcaaggtagaagaaacgctaaaa gcccttaaaggctcggtgaaagatttaggtatcaatccagaatggatttcaaaagttgaa aaccttaatgcagctttgaatgaattcaaaaatggcaaaaataaggatttcagtaaggta acgcaagcaaaaagcgaccttgaaaattccattaaagatgtgatcatcaatcaaaagata acggataaagttgataatctcaatcaagcggtatcaatggctaaaatagcgggtaatttc agtggggtagagcaagcgttagccgatctcaaaaatttctcaaaggagcaattggctcaa caagctcaaaaaaatgaaagtttcaatgttggaaaatctgaaatataccaatccgttaag aatggtgtgaacggaaccctagtcggtaatggattatctggaatagaggccacagctctc gccaaaaatttttcggatatcaagaaagaattgaatgagaaatttaaaaatttcaataac aataacaatggtctcaaaaacggcaaggataaaggacctgaagaacccatttacgctcag gttaataaaaagaaaacaggacaagtagctagccctgaagaacccatttatgctcaagtt gctaaaaaggtaactcaaaaaattgaccaactcaatcaagcagcaagtggtttcggtggt gtagggcaagcgggcttccctttgaaaaggcatgataaagttgaagatctcagtaaggta gggcgatcagttagccctgaacccatttatgctacgattgatgatctcggcggatctttc cctttgagaagaagtgccgcagttgatgatctcagtaaggtagggcgatcaagggagcaa gaattgactcagaaaattgacaatctcagtcaagcggtatcagaagctaaagcaggtttt tttggcaatctagagcgaacgatagacaagctcaaagattctacaaaaaacaatcctgtg aatctatgggctgaaaatgcaaaaaaagtgcctgctagtttgtcagcgaaactagacaat tacgctactaacagccacacacgcattaatagcaatatccaaaatggagcgatcaatgaa aaagcgaccggtatgctaacgcaaaaaaaccctgagtggctcaagctcgtgaatgataag atcgttgcgcataatgtgggaagcgttcctttgtcagagtatgataaaattggcttcaac cagaagaatatgaaagattattctgattcgttcaagttttccaccaagttgaacaatgct gtaaaagacgttaagtctggctttacgcaatttttagccaatgcattttctacagggtat tactccttggcgcgggaaaatgcagagcatggaatcaaaaatgctaatacaaaaggtggt ttccaaaaatcttaa

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