Helicobacter pylori 908: hp908_0940
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Entry
hp908_0940 CDS
T01893
Name
(GenBank) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpi
Helicobacter pylori 908
Brite
KEGG Orthology (KO) [BR:
hpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpi03016
]
hp908_0940
Enzymes [BR:
hpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
hp908_0940
Transfer RNA biogenesis [BR:
hpi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
hp908_0940
Prokaryotic type
hp908_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
ADN80066
LinkDB
All DBs
Position
926050..927195
Genome browser
AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSTRDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHKEG
LKILQNETKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISTFSVKENLEFFKQKNLS
VNSNALKALKNQAHPFKILEGDVMRHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKK
ALYAKNLSLEIEKGFQHNLLSSHARTLGSRRFFWVFAENITSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcactagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgccgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccat
cacaataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacggagcaagttttagaacaaatcgcgcagtttggc
atgcctaattattttggttcgcaacgctttgggaagttcaatgacaaccataaagagggt
ttaaaaatcttacaaaatgaaacgaaattcgctcatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaactcgcttttaagcaaacgattagaaatcagtaaa
atcattagcacttttagcgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttaattcaaacgccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgcgccattacccttatgggaagttttttgacgctttgaaattagaaaaa
gagagcgaaaggtttttgaacaaagaagctgtgcctacggggttactagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaaggattccagcataacctttta
agtagccatgctagaacgctaggatccaggcggtttttttgggtgtttgcagaaaatata
acttctcaatacatcaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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integrated database retrieval system
