Helicobacter pylori 908: hp908_1148
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Entry
hp908_1148 CDS
T01893
Symbol
ffh
Name
(GenBank) Signal recognition particle
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hpi
Helicobacter pylori 908
Pathway
hpi02024
Quorum sensing
hpi03060
Protein export
hpi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
hp908_1148 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
hp908_1148 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hp908_1148 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hpi02044
]
hp908_1148 (ffh)
Enzymes [BR:
hpi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
hp908_1148 (ffh)
Secretion system [BR:
hpi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
hp908_1148 (ffh)
Eukaryotic Sec-SRP protein
hp908_1148 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
Zeta_toxin
AAA_22
AAA_30
AAA_24
cobW
nSTAND3
AAA_19
SLFN-g3_helicase
AAA_17
NPHP3_N
6PF2K
AAA_16
APS_kinase
ArsA_ATPase
ResIII
AAA_14
AAA
Fer4_NifH
ABC_tran
T2SSE
AAA_11
AAA_33
NACHT
Thymidylate_kin
KAP_NTPase
ParA
KTI12
DO-GTPase1
AAA_5
AAA_18
TsaE
MraZ
ATP_bind_1
YqeC
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
ADN80271
LinkDB
All DBs
Position
complement(1116720..1118066)
Genome browser
AA seq
448 aa
AA seq
DB search
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLS
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLNKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDL
ESSLEVKKIKAMVNSMTKKERENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcgttaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagacgaattgaaaaaaacgcttttaaaaaacgat
gtgcatcataaagtggctagagaattgctcaaaaaggtggaaagccaaactaaacttagc
ggtattggtaagcagcaatttttagacgccttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggtttcactttcgctcaaacgcctcccaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcttagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagtttttcatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaagagggctaaagaagcgcaatttgatgttttactc
gtggatagcgcggggcgtttagccattgataaggagcttatgcaagaattaaaggaagtt
aaagaagtcttaaacccccatgaagtgctgtatgtcgcagacgcgttgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagcggggtggtgttaagc
aagtttgatagcgattctaaagggggtatcgccttaggcatcacttaccaattaggcttg
cccttgcgttttattgggagcggggaaaaaatccctgatttagacgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgct
agcgttttaaaccctaatgaagccaaagacttaaacaaaaagctcaaaaaagggcaattc
actttcaacgactttttaaaccaaattgaaaaggtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaacatggcaagcgcactaaaagacacggattta
gaaagttctttagaagtgaaaaaaatcaaggccatggtcaattccatgaccaaaaaagag
cgagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaaccaataaaaagggcattagcgatttgatgaatctcatgagtcaggctaaa
aatcaaacgccccctaaaatgcactga
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