Helicobacter pylori 908: hp908_1442
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Entry
hp908_1442 CDS
T01893
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpi
Helicobacter pylori 908
Pathway
hpi03030
DNA replication
hpi03430
Mismatch repair
hpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
hp908_1442 (dnaE)
03430 Mismatch repair
hp908_1442 (dnaE)
03440 Homologous recombination
hp908_1442 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpi03032
]
hp908_1442 (dnaE)
03400 DNA repair and recombination proteins [BR:
hpi03400
]
hp908_1442 (dnaE)
Enzymes [BR:
hpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
hp908_1442 (dnaE)
DNA replication proteins [BR:
hpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
hp908_1442 (dnaE)
DNA repair and recombination proteins [BR:
hpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
hp908_1442 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADN80563
LinkDB
All DBs
Position
complement(1386722..1390357)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLIFLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTNNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAKEEGLDFEDDASYFAHKAREGLKERLILVPKEKHDQYKERLEKEIEVITNMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNEIAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKIGVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGVEPIAYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAIKGVGGEPIKNIIEERTKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMEGGIKEQVVLDMVDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLNALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPEKQKEDVREIPPIEMLA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagccttcacgcatttgcacttgcacacagaatattcgcttttagac
ggggcgaacaagattaaaatcttagccaaacgcattaaagaattgggcatgaaaagcgtg
agcgtaaccgaccatgggaacatgtttggagcgattgatttttacacgagcatgaaaaaa
gaaggcatcaagcctattatcggcatggaagcgtatatccataacgatgacaatctctct
agcaaagagactaagcaacgcttccatttgtgcctgttcgctaaaaaccaagagggctat
gaaaacttgatatttttaagctctatggcgtatttagaagggttttattatttcccgcgc
atcaataaaaagcttctaagggagcattctaagggcattatcgcttctagcgcgtgcttg
caaggggaagtcaattaccatttgaatactaacaatgagagaaaccgcaagtatggggct
aaaggctatgatgaagctaaaaaaatcgcttgcgaataccaagagatttttgaagacgat
ttttatttagaaatcatgcgtcatggcattttagatcagcgattcattgatgaacaagtc
attaaaatgtctttagaaacagggttaaaaatcatcgccaccaacgacacccactacacc
atgcctaatgacgctaaggctcaagaagtggcgatgtgcgtagcgatgggtaaaacccta
aacgataaggggcgcttgaaacactccgtgcatgagttttacattaaatcccctgaagaa
atggcgaagctgtttgcggatattccagaagctttagaaaacacccaagagatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccccccaacccccccaagc
tttaaattcactaaagcttacgctaaagaagagggtctggattttgaagatgacgcttct
tatttcgcccataaggccagagaaggcttgaaagagcgcttgatcttagtgcctaaagaa
aagcacgatcaatacaaagagcggctagaaaaagaaattgaagttatcacgaacatgaaa
ttcccagggtatatgctgatcgtgtgggattttatccgttacgctaaagaaatgggcatt
cctgtaggacctggtagggggagcgcggccgggagtttggtggcttttgccttaaaaatc
accgatattgaccctttgaaatacgatttgctctttgaaaggtttttgaaccctgaacga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggctcaagttatcacctttaataaaatg
ttagctaaaggcgtgatcagagatgtcgcaagggttttggacatgccttataaggaggcc
gatgattttgccaaactcatccctaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggtgagttcatagagggggcgtgggaattagagcctaaaatcaaggaattggtggag
agcaatgaaatagccaaacaggtgtgggaatattcgctcaatttagagaatttgaatcgc
aacgcaggcgtgcatgccgcagccttagtggtggatagccaaaaagagttgtggcataaa
acccctttgtttgcctctgaaaaaaccggcggtatcgttacgcaatattccatgaagtat
ttagagccggtggatttgatcaagtttgactttttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacgcaacataagattggtgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgatccaaagcggcgatacggtggggatattc
cagattgaatccgggatgtttcaagggcttaacaagcgcttaaggccttcaagctttgaa
gacattatcgccattatcgcgctagggagaccggggcctatggaatcaggcatggtagat
gattttgtgaatagaaagcacggcgttgagcctatcgcttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaggtgatgcaaatcgtg
caaactatcggcggttttagtttgggtgaagcggatctcatccgccgcgctatggggaaa
aaagacgctcaaatcatggcggacaataaggcgaagtttgtagaaggcgctaaaaattta
gggcatgatggccaaaaagcggctaatttgtgggatctgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcagcggcttatgcgatgatcactttccaaacggcgtattta
aagacttattataagcatgagttcatggcagcgatgctcactagcgaatccaataagatc
gaatccgtggcgcgctatattgatgaggttagggctttagaaattgaagtgatgcctccg
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaatcaaaagggcgaa
ttagaaaagaaaatcgtgttcggtttaggggcgattaaaggggttgggggtgagccgatt
aaaaacatcattgaagaaaggactaaaggggattataagagtttggaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattggtgaaatcagggagc
ttggacaatttaggctacactagaaaaaccatgctcgctaacttggatttgatctgcgat
gctgggcgcgctaaagacaaggctaatgaaatgatgcaagggggcaattctctttttgga
gccatggagggcggaattaaagagcaggttgttttggacatggttgatttgggcgagcat
gacgctaaaacgcttttagaatgcgaatatgaaactttaggaatccatgtttcaggcaac
cctttagacgagtttaaagaagagattaagggctttaaaaatttagtcaaaagcattgac
attgaagagttagaaatcggatcgcaggcttatttgctgggtaaaatcatggaggttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggatcgatac
ggcaagtttgaactcatgctttttgaaaagcaactaaacgctttggaagagttggatatt
aataagcctctcgtgtttaaatgcaagattgaagagcaagaagaagtggcgcgattgagg
ctttttgaaatcttggatttagagagcgctagggaggttaaaatccctaaagcccgttat
aaagaccctgaaaagcaaaaagaagacgtgcgcgaaatccctcccattgaaatgctcgct
tctagttcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagtgctctaaaacaccagggtaaacgccccttgtatttgatcatcaaa
gataaggataagcaattcaaaatccaaagcgatctaatggtgaatgaaaagatcaaggac
gattttaaagggttagagtggagggatttagcttga
DBGET
integrated database retrieval system
