Helicobacter pylori 908: hp908_1542
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Entry
hp908_1542 CDS
T01893
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpi
Helicobacter pylori 908
Pathway
hpi03030
DNA replication
hpi03430
Mismatch repair
hpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
hp908_1542 (dnaQ)
03430 Mismatch repair
hp908_1542 (dnaQ)
03440 Homologous recombination
hp908_1542 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpi03032
]
hp908_1542 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hpi03400
]
hp908_1542 (dnaQ)
Enzymes [BR:
hpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
hp908_1542 (dnaQ)
DNA replication proteins [BR:
hpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
hp908_1542 (dnaQ)
DNA repair and recombination proteins [BR:
hpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
hp908_1542 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADN80662
LinkDB
All DBs
Position
complement(1492866..1493729)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIHDEINLEYLKACGLNFIETSENLVT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVRGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRSRYQEIPSPFSLFERTKGLLDIMKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacatccaagccctaatcgctcgcttaaagcaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttattcatgatgaaatcaat
ttggaatatttaaaagcgtgcgggcttaatttcatagaaacaagcgaaaatttagtcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccctaaaacatgagattttagaaatcggggccgtgcaagtgaggggg
ggggaaattattaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcacttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtggcccacaacgctaatttt
gattacaattttttagggcgttattttgtagagaaattgcattgccctttattgaattta
aagctttgcactttggatttatccaaacgcgccattttgtccatgcgttattctttgagt
tttttaaaagagcttttagggtttggcatagaagtcagccacagagcctatgcggacgct
ttagcgagctacaagctctttgaaatatgcctgttaaacttgcccagctacatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacactttgatcaaaagacccccaaga
tccagataccaagagatcccatcgccgttttctctttttgaaaggacaaaaggtttgtta
gacattatgaaagcgaccagttaa
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