Halomonas piscis: P1P91_01410
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Entry
P1P91_01410 CDS
T09638
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpis
Halomonas piscis
Pathway
hpis03420
Nucleotide excision repair
hpis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P1P91_01410 (uvrD)
03430 Mismatch repair
P1P91_01410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpis03400
]
P1P91_01410 (uvrD)
Enzymes [BR:
hpis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P1P91_01410 (uvrD)
DNA repair and recombination proteins [BR:
hpis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P1P91_01410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P1P91_01410 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WNK20371
LinkDB
All DBs
Position
complement(295837..298047)
Genome browser
AA seq
736 aa
AA seq
DB search
MDDVTAILDSLNSAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLNISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDADDQ
LRLVKRLLKDYSIDAERYPPRQVQSFISGCKEEGLRPSQVNTAGDAYLSQMVELYHFYQL
TCERGGLVDFGELLLRSLELLRDNPALLAHYQERFGHVLVDEFQDTNTLQYAWLKLLTGQ
QTPTTVVGDDDQSIYGWRGARVENISRFANEFPQVHTVRLEQNYRSTSAILDAANALISH
NAERMGKKLWTDGAEGEPISVYAGFNDLEEARFIVDTLKERTAAGLNRRDVAILYRSNAQ
SRLLEETLIRQGIPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASMERVINVPTRGIG
TRTVEVLRFRARDQGVTMWQALHDSVSDGTLKGRAANAVRAFADLIEQLDNDAAGLALHE
IIEHVTARTGLIEHHRAEPGEKGQGRVENLEELVNAARAFTQGDVFDAPEAGEGLTALEA
FLSEAALNAGEHEAEEFEDSVQLMTLHSAKGLEFPLVFIAGVEEGLFPHKMSLEEPGRLE
EERRLAYVGVTRAMHKLYLTHAETRRLHGKEIFPRPSRFLRELPAELLEEVRLRGQVSRP
VTARGSASSSLSQQSVEGDDDLPSLHVGQAVEHPVFGEGVILNAEGEGARARVQVSFENE
GAKWLVLGFAKLIPLS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtgacggcgattctcgattcgctcaactccgcccagcgcgaggcggtgagc
gcgccccagggcaaccttctggtgctggccggtgccggctcgggcaaaacccgggtgctg
gtgcaccgcattgcctggctgatgcaggccgaagggctttcgccctacgcgctgctggcg
gtgacctttaccaacaaggccgcccgggagatgcgcacccggctggaggcgctgctgaac
atttccatgcgccacgtctgggtgggcacctttcactccatcgcccaccggctgttgcgc
acccactggcaggatgcgcgcctgccccagcacttccagatcatcgacgccgacgatcag
ctgcgcctggtcaagcgcctgctcaaggactacagcatcgacgccgagcgctacccgccg
cgccaggtgcagagctttatcagcggctgcaaggaagaagggctgcgcccgtcccaggtg
aataccgccggcgacgcctacctgagccagatggtcgagctctaccacttctatcagctg
acctgcgagcgcggggggctggtggacttcggcgagcttctgctgcgtagcctcgagctt
ctgcgcgacaaccccgcactgctggcccactatcaggagcgcttcggccatgtgctggtg
gacgagtttcaggacaccaacaccctgcagtacgcctggctcaaactgctcaccggccag
caaacgcccaccaccgtggtgggcgacgacgaccagtcgatctacggctggcgcggcgcc
agggtggaaaacatcagccgcttcgcgaacgagttcccccaggtgcacaccgtgcgcctg
gagcagaactaccgctccaccagcgcgatcctcgacgccgccaacgcgctgatcagccac
aacgccgagcgcatgggcaaaaagctgtggaccgacggcgccgaaggcgagccgatctcg
gtgtatgccggcttcaacgacctggaagaggcgcggtttatcgtcgataccctcaaggag
cgcaccgccgccgggctcaaccgccgggacgtggcgattctctaccgctccaacgcccag
tcccggctgctggaagaaacgctgatccgccagggcatcccctaccgcatctacggcggc
caccgcttttacgaacgcctggaaatcaagaacgccctggcctatctgcgtctgctgctc
aaccgcgacgatgacgcctccatggagcgggtgatcaacgtgcccacccggggcatcggc
acgcgcacggtggaggttttgcgctttcgcgctcgggatcagggcgtcaccatgtggcag
gcgctccacgacagcgtaagcgacggcaccctcaagggccgcgcggccaacgccgtgcgc
gccttcgccgatctgatcgagcagctggacaacgacgccgcgggcctggccctgcacgag
atcatcgagcacgttaccgcccgcaccggcctgatcgagcaccaccgggccgagcccggc
gagaaaggccagggccgagtggaaaacctcgaagagctggtcaacgccgcccgggccttc
acccagggcgacgtcttcgacgccccggaagccggcgagggcctcacggcgctggaggcg
tttttgtccgaggccgcgctcaacgccggcgaacacgaggccgaggagttcgaggacagc
gtccagctgatgaccctgcactcggccaaggggctggagtttccgctggtattcatcgcc
ggcgtcgaggaagggctgttcccccacaagatgtcgctggaggagcccggccgccttgag
gaagagcgccggctggcctacgtcggcgtcacccgggcgatgcacaagctgtacctgacc
cacgccgaaacccggcgcctccacggcaaggaaatcttcccccggccgtcgcggtttctg
cgcgagctgcccgccgagctgctggaagaagtgcgcctgcgcggccaggtctcgcggccg
gttaccgcccggggcagcgcgtcgtccagcctttcccagcaaagcgtggaaggcgacgac
gacctgcccagcctgcacgttggccaggcggtggagcacccggtattcggcgagggcgtg
atcctcaacgccgagggcgaaggcgcccgggcccgggtgcaggtcagcttcgaaaatgaa
ggcgccaaatggctggtgctgggctttgccaagctgattccgctatcgtag
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