Halomonas piscis: P1P91_03170
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Entry
P1P91_03170 CDS
T09638
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpis
Halomonas piscis
Pathway
hpis03030
DNA replication
hpis03410
Base excision repair
hpis03420
Nucleotide excision repair
hpis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P1P91_03170 (polA)
03410 Base excision repair
P1P91_03170 (polA)
03420 Nucleotide excision repair
P1P91_03170 (polA)
03440 Homologous recombination
P1P91_03170 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpis03032
]
P1P91_03170 (polA)
03400 DNA repair and recombination proteins [BR:
hpis03400
]
P1P91_03170 (polA)
Enzymes [BR:
hpis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P1P91_03170 (polA)
DNA replication proteins [BR:
hpis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P1P91_03170 (polA)
DNA repair and recombination proteins [BR:
hpis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
P1P91_03170 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P1P91_03170 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WNK20695
LinkDB
All DBs
Position
665937..668714
Genome browser
AA seq
925 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPALTTSTGAPTGAVKGVLNMLKRLIKDYPESPMAVVFD
APGKTFRDELYEEYKANRPPMPDDLRSQIEPLYQCVRALGLPLLCIEGVEADDVIGTLAR
HATEAGRDAVVSTGDKDMAQLVNGHITLVNTMKGETLDVAGVEDKFGLPPERIVDFLALM
GDKVDNIPGVPGVGEKTALGLLQGMNGGLDTVYGDLERVTTLGFRGAKSLPKKLEAHRDQ
AFLSYDLATIKTDCELPAGLDDLEIAHPDREALVALYRELEFKRELAELLEGRDEGVDDV
KGGTSAPESAAEGDGDTGESSSRQREDAVITIQKELDAWLARLQKAERFCFDLETTSLNY
MEAEIVGVGLALEAGEAAYIPLAHDYLDAPEQLDRRAVLEALTPLWESADKTKLGQNLKY
DISVLASYGISVAPPLADTMLASYVLNSTATRHDMDSLALKYLGETTTAFADVAGKGARQ
LTFNQVALEQAVPYACEDVDITLRLFDELMPRVKGEGRLEEVLETLELPLIPVLSRMERA
GVALDVERLHAQSKELEARIHELEQKAFDLAGREFNLSSPKQLGEILFDEQKIPVLKKTP
KGAPSTAEAVLEELALDYPLPKVIIEHRGLSKLKSTYTDKLPRLVNPVTERVHTSYHQAV
TATGRLSSSDPNLQNIPIRTEEGRKIRQAFTARPGYRVVAADYSQIELRIMAHLSEDEGL
LKAFAEGKDIHAATAAEVFGTELGKVTGDQRRSAKAINFGLIYGMSAWGLSRQLHIERNQ
AQIYIDRYFDRYPGVGRYMERIRAQAAEDGFVETVAGRRLYLPEITAQNRNRRQAAERTA
INAPMQGTAADIIKRAMIDVDAWLQEGEFDALMVMQVHDELVFEVAESQIDAFKKEVAKR
MENAASLSVALTVEAQSGTHWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgcacccatcgttttagttgacggctcttcctacctttaccgggcgtttcac
gcgctgccggcgctgaccacctctaccggggcgcctaccggcgcggtcaagggcgtgctc
aatatgctcaagcgcctgatcaaggactatcccgaaagccccatggcggtggtgttcgac
gccccgggcaaaacctttcgcgacgagctttacgaggagtacaaggccaaccgcccgccg
atgcccgacgacctgagaagccagatcgagccgctttaccagtgcgtcagagcgctgggg
ctgccgcttttgtgcatcgagggcgtcgaggccgacgacgtcatcggcacccttgcccgc
cacgccaccgaggccgggcgcgacgcagtggtctccaccggcgacaaggacatggcccag
ctggtcaacggccatattacgctggtcaacaccatgaagggcgaaaccctggacgtcgcc
ggcgtcgaggacaagttcggcctgccgccggagcggatcgtcgattttctcgcgctgatg
ggcgacaaggtcgataacattcccggcgtgcccggcgtcggcgagaaaaccgcgctggga
ctcttgcagggcatgaacggcggcctggacactgtgtacggcgatctggagcgcgtgacg
acgctcggctttcgcggcgccaagagcctgcccaaaaagctcgaagcgcaccgcgatcag
gcgtttttgtcgtatgaccttgccaccatcaagaccgactgcgagctgcccgccggcctc
gacgacctggagattgcccacccggaccgggaggcgctggtggcgctctaccgcgagctc
gagttcaagcgcgagcttgccgagcttttggaaggccgggacgaaggcgtggacgacgtg
aagggcggcacctcggcaccggaaagcgccgccgaaggcgatggcgatactggcgagtcg
tcttcccgccagcgagaagatgcggttatcaccatccagaaggagctcgacgcctggctt
gcccggctacaaaaggccgagcgcttctgctttgacctggaaaccaccagcctcaactac
atggaggcggagatcgtcggcgtagggcttgcgctcgaggccggcgaggcggcctacatt
ccgctggcccacgactatctcgacgccccggagcagctcgaccgccgggcggtgctcgag
gcgctcactccgctctgggagagcgccgacaagaccaagctcggccagaacctcaagtac
gatatctcggtgctggcaagctacggcatcagcgtcgcgccgccgcttgccgacaccatg
ctcgcctcctacgtgctcaactccaccgccacccgccacgacatggactcgctggcgctc
aaatacctgggcgaaaccaccaccgcctttgccgacgtggcgggcaagggcgccaggcag
ctcaccttcaaccaggtggcgctggagcaggccgtgccctatgcctgcgaagacgtggac
atcacattgcggctgttcgacgagctgatgccccgggtcaagggcgaaggccggctggaa
gaggtgctggaaacccttgagctgccgctgatcccggtgctctcgcgcatggaacgcgcc
ggcgtggcgctggacgtcgagcgcctgcacgcccagagcaaggaactcgaggcgcgcatt
cacgagctggaacaaaaggcctttgatctggccgggcgcgagttcaacctgagctcgccc
aagcagctcggcgagattctgttcgacgagcagaaaatccctgtgctcaagaaaaccccc
aagggcgcaccgtccaccgccgaagcggtgcttgaggagctggcgctggattacccattg
cccaaggtcatcatcgaacaccgcgggctttccaagctcaagtccacctacaccgacaag
ctgccgaggctggtcaaccctgtcaccgagcgggtgcacaccagctaccaccaggcggtg
acagccaccgggcggctgtcgtcgtcggaccccaatctgcagaacattcccatccgcacc
gaggaagggcgcaagatccgccaggcgttcaccgctcggccgggctaccgcgtggtcgcc
gccgactactcccagatcgagctgcgcatcatggcgcacctgtccgaagacgaggggctg
ctcaaggccttcgccgagggcaaggacatccacgccgccaccgccgccgaggtgttcggc
accgagcttggcaaggtcacaggcgaccagcggcgcagcgccaaggccatcaacttcggg
ctgatctacggcatgagcgcctggggtctttcccgccagctgcacatcgagcgcaaccag
gcgcagatctacatcgaccgctactttgaccgctaccccggcgtgggccgctacatggag
cgtatccgcgcccaggccgccgaagacggctttgtcgaaaccgttgccggccggaggctc
tacctgcccgagatcaccgcccagaatcgcaaccgccgccaggccgccgagcgcaccgcg
atcaacgcgcccatgcagggcaccgcggcggacatcatcaaacgcgcgatgatcgacgtc
gacgcctggctgcaggaaggcgagtttgacgccctgatggtgatgcaggtccacgacgaa
ctcgtcttcgaagtcgccgaaagccagatagacgccttcaagaaagaagttgccaaacgc
atggaaaacgccgccagcttaagcgtcgcgctaaccgtagaagcgcaaagcggcacccac
tgggacgaagcgcattaa
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