Halomonas piscis: P1P91_03625
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Entry
P1P91_03625 CDS
T09638
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hpis
Halomonas piscis
Pathway
hpis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P1P91_03625 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpis03021
]
P1P91_03625 (rho)
03019 Messenger RNA biogenesis [BR:
hpis03019
]
P1P91_03625 (rho)
Transcription machinery [BR:
hpis03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P1P91_03625 (rho)
Messenger RNA biogenesis [BR:
hpis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P1P91_03625 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
AAA
AAA_22
S1CSD-TOTE-2
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
WNK20781
UniProt:
A0ABY9Z294
LinkDB
All DBs
Position
771783..773042
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKSVPELLDIARQMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSIAGKIRPPKDGERYFALLKVSQIN
FDRPENAKHKILFENLTPLFPDERMRMEMGNGSKEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATTLVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVFPAFNI
RRSGTRREDLIASEEEMQRMWILRKLLHPMDDVGATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaactcaagcaaaaatccgttcctgagctgctcgatatcgcccgccag
atggggatcgataatctggctcgctcgcgcaaacaggacatcattttcgccatcctcaaa
aagcacgccaaaagcggcgaggacatctacggcgacggtgtgctggaaattctccaagac
ggctttggctttctgcgcagcgccgacagctcctatctggccggccccgacgacatctac
gtctcgccgtcgcagattcgccgcttcaacctgcgcaagggcgactccatcgccggcaag
atacgcccgcccaaggacggcgagcgctactttgccctgctcaaggtcagccagatcaac
tttgaccggccggaaaacgccaagcacaagatcctgttcgagaacctcacgccgctgttt
cccgacgagcgcatgcgcatggaaatgggcaacggctcgaaagaggacctgaccgcgcgg
atcatcgatctcactgcgcccatcggcaagggccagcgggggcttctggtatcgccgccc
aaggcgggcaagacgttgatgctgcagaacatcgccacctcgatcacgcgcaacaacccc
gagtgccacctgatcgtgctgctcatcgacgagcgcccggaagaggttaccgaaatgtcg
cgcaccgtgcgcggcgaagtggtggcctcgacctttgacgagccgccggcgcgtcacgtc
caggtagccgagatggtcatcgaaaaggccaagcggctggtcgagcacaaaaaggacgtg
gtgatcctgctcgactccatcacccgcctggcccgggcctacaacaccgtggtgcccagt
tcgggcaaggtgctcaccggcggcgtcgatgctcatgccctggaaaagcccaagcgcttt
ttcggcgccgcgcgcaatatcgaggaaggcggcagcctgacgattctcgccaccacgctg
gtggataccggctcgaagatggacgaagtcatcttcgaggagttcaagggtaccggcaac
atggaagcccatctggaccgcaagctcgccgaaaagcgcgtgttccccgcgttcaacatc
cgccgcagcggcacccgccgagaggatctgatcgcctcggaagaagaaatgcagcgcatg
tggattttgcgcaagctgctgcatccgatggacgacgttggcgctaccgagtttctgatc
gaccggctgaaggataccaagaccaacctggagtttttcgaggccatgaagcgtcgctag
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