Halomonas piscis: P1P91_04230
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Entry
P1P91_04230 CDS
T09638
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hpis
Halomonas piscis
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpis03021
]
P1P91_04230 (rpoS)
Transcription machinery [BR:
hpis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P1P91_04230 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WNK20891
LinkDB
All DBs
Position
892019..892996
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AA seq
325 aa
AA seq
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MSTVEQDLQEVDLNAVEEALEALDDKQTAAEEEAFERALGREDRSRAQSLDATQIYLNEI
GFSPLLTPEEEVFYGRLARQGDPLGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAAREL
TQRLDYEPTAEEIAEHLDKPVATVKKMLGFNERVSSVDHPVGGDSDKPLIDTLADDDEIG
PEAALVDGNVKQLVDHWLGSLGEKQREVVVRRFGLRGHEAATLEEVGAEIGLTRERVRQI
QVEALKKLRLMLEKQGLSLDAIFES
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtagagcaagatctgcaggaagtggacctgaacgcggtggaagaagcgctg
gaggcgcttgacgacaagcagaccgcggcggaagaagaggcatttgaaagagcccttgga
cgggaagatcggtcgcgtgcccaaagccttgacgcgacccagatttacctcaacgaaatc
ggcttctcgccgctgctgacgccggaggaggaggtgttttacgggcgcctggcgcgccag
ggcgacccgctgggccggtcgcgaatgatcgagtccaacctgcggctggtggtcaagatt
gcccggcgctatctgaaccgcggccttacgctgcttgacctgatcgaggagggcaacctg
gggctgatccgcgcggtggaaaagttcgaccccgagcgcgggttccgcttttcgacctac
gccacctggtggattcgccagaccatcgagcgggcgctgatgaaccagacccgcacgatt
cgtctgccgatccacgtggtgaaagagctcaacatttatctgcgcgccgcccgggagctg
acccagcggctggactacgagcccacggcggaagaaattgccgagcatctggacaagccc
gtggccacggtcaagaaaatgctgggcttcaacgagcgggtgtcgtcggtggaccacccg
gtgggcggcgacagcgacaagccgcttatcgacaccctggccgatgacgacgagattggc
cccgaagccgcgctggtggacggcaacgtcaagcagcttgtggaccactggctgggctcg
ctgggagaaaagcagcgcgaagtggtcgtgcgccgcttcggtctgcgcggacacgaagcc
gccaccctggaagaggtcggcgcggaaatcggcctgacccgggagcgggtgcgccagatc
caggtcgaggcgctgaaaaagctgcgcctgatgctggaaaagcagggtctgtcgctggac
gccatctttgaaagctga
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