KEGG   Halomonas piscis: P1P91_04735
Entry
P1P91_04735       CDS       T09638                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
hpis  Halomonas piscis
Brite
KEGG Orthology (KO) [BR:hpis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpis03016]
    P1P91_04735
Enzymes [BR:hpis01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     P1P91_04735
Transfer RNA biogenesis [BR:hpis03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    P1P91_04735
 Prokaryotic type
   tRNA splicing ligases
    P1P91_04735
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: WNK20988
UniProt: A0ABY9Z1J2
LinkDB
Position
997009..998199
AA seq 396 aa
MTQTNVRPFSGKAVIDTEALPIKLWLDESELGQGALDQARDLANLPYAFRHIAIMPDSHQ
GYGMPIGGVLATRDAIVPNAVGVDIGCGMGSLRTDLDDIGTADLKAIMKQIRKTVPVGSA
HHKTPQDEAWMPERKGELPVVEAQYDRALYQLGTLGGGNHFIEVQKGSDGHVWIMVHSGS
RNLGFTVASHYHEVAKSLNEADGDPLPPDLSHLPKTSEFFALYRDEMNYCLEFALANRQL
MMERVKQAFVEVMGDIDFSHFINKPHNFAAEEAHFGERVMVHRKGATRARAGEWGMIPGS
QGTRSFLVTGKGEAFSFHSCSHGAGRVMSRARARKTLDFKAEAKRLKEQGVLHALRGRKD
LDEAPGSYKDIDTVMRNQKDLVDVQVELAPLAVVKG
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgacacagacaaacgtcagacccttttcgggaaaggcagtgatcgataccgaggcgctg
ccgatcaagctgtggctcgacgaaagcgagctggggcagggggcgctggatcaggcccgg
gatctggccaatctgccctatgcctttcgccatattgccatcatgcccgacagccaccag
ggctacggcatgcccattggcggagtgctggccacccgggacgccattgtacccaacgcc
gtgggcgtggatatcggctgcggcatgggctcgctgcgcacggaccttgacgatatcggc
acggcggacctgaaagcgatcatgaagcagatccgcaaaacggttcccgtggggtcggcg
caccacaaaacgccccaggatgaagcctggatgcccgagcgcaagggcgagctgcccgtg
gtggaggcgcagtacgacagggcgctttaccagctgggcactctgggcggcggcaaccac
ttcatcgaggtgcagaaaggctcggatggccatgtctggatcatggtgcattccggttcg
cgaaacctgggcttcaccgtggcgagccactaccacgaggtggccaaaagcctgaacgag
gcggatggcgacccgctgccgccggacctgtcgcacctgccgaaaacgtccgaattcttc
gccctctatcgggacgaaatgaactactgcctcgagtttgccctggccaaccggcagctg
atgatggagcgcgtcaaacaggcgtttgtcgaggtgatgggcgacatcgacttctcgcac
tttatcaacaagccccataacttcgccgccgaggaagcgcatttcggcgagcgggtgatg
gtccaccgcaagggcgcgacccgggcccgggccggcgagtggggcatgatccccggctcc
cagggcacgcgctcctttctggtcacgggcaagggcgaggccttttccttccactcctgc
tcccacggcgccgggcgggtgatgagccgtgcccgggcgcgcaagacgctggacttcaag
gccgaagcgaagcggctcaaggagcagggggtgcttcacgccctgcgcgggcgcaaggat
ctggacgaggcgccgggctcgtacaaggacatcgatacggtgatgcgcaaccagaaagac
cttgtcgatgttcaggtcgagcttgcgccgctggccgtggtcaagggctga

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