Halomonas piscis: P1P91_05170
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Entry
P1P91_05170 CDS
T09638
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hpis
Halomonas piscis
Pathway
hpis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P1P91_05170 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpis03400
]
P1P91_05170 (recB)
Enzymes [BR:
hpis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P1P91_05170 (recB)
DNA repair and recombination proteins [BR:
hpis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P1P91_05170 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WNK21070
LinkDB
All DBs
Position
complement(1091171..1094875)
Genome browser
AA seq
1234 aa
AA seq
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MTTAVLDPLTLPLHGSRLIEASAGTGKTFTIALLYVRLVLGGSDTDDPSAFSRPLTPPEI
LVMTFTNAATQELRERIRRRLVEAAEAFLAEGDDSAHDSLLLELRAQYPRSVWTACARRL
ALAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFSLELEHDQQELELEVVRDYWRCFYYP
LDADSLGQISGFWASPEALHESLKKLLADSEALPCPPPPGAILKRARESRARMLAELKAP
WPAMLDEIEPTLEQADVDNAFQRAKLKKNWRKTWLGALREWAESDADRPDLKKGWERLTP
DGMRDIWKDGDPPFPEAWAAVEALPAALAQLPRPYAELLAHAVHWCRARLEREQERRAEM
GPTELLTHLDRALKGPNRQALAEQIRRQFPVALIDEFQDTDPVQYRLFNAVYDVATPAED
RAIMLIGDPKQAIYAFRGADIFTYLQAREDTAGRHVTLGKNFRSTQAMVEAVNHCFAYAD
RHAGGAFLFRDGDGSSDDDSPLPFIPVRARGRPERLTLDGETLSAMTLWHLDSDDGKPLG
KGEYQDAMADGCASHMVRLLNAGQRRQAGFEGDDGLTPLRPSDMAVLVNNGTEAGLIRDA
LARRGVKSVYLSDKDKVFSSPMAAQVARWLAACSEPLASSRQAQSRLRAALATPALGLDL
ADLEHLARDELAWEKQIERFGDYHRLWQRQGVLPLLRRMMVDFAIPARLLAQRGAGDSGE
RQLTDLLHLGELLQQASQELDGEHALLRFLHEAMADPDGYGDSHRLRLESDADLVKVVTI
HKAKGLEYPLVFLPFIANHRPTKATDTPLRWHAADGTPRLSLAPDEAVLAAADRERLGED
MRKLYVALTRASHAVWLGLAPLGDMDARAVGHLLGGQPVEDGGLEALVEGSDIALKPAPE
ASDECFVPPAGNAALASARTPARHAKEHWWIASYSALALSGALTRPADMPPAAAEPATAR
EATALEVLDEPRDDKAETDSAHLHRFPRGPGPGTFLHGLLEWAGREGFAAALSDGEALDD
TLRRRLQLRGWQRWHGVLTHWLSELVAASLPLPAPEGAGASTVALTELGDYQVELEFWFA
ADQVDTRELDRLVCTHLMPGIERPALERDTLNGMLKGFIDLAFAHQGRFYVLDWKSNYLG
RDDAAYGTEAMRRAVLDKRYDVQSALYLLAMHRLLKARLPNYDPARHLGGAMTVFLRGSR
TPSRGVHAAPASAALVGALDNLFSPDATRQEAGR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccgttctcgaccccttgacgctgccgcttcacggcagccgcctgatcgaa
gccagcgccggcaccggcaagaccttcaccattgccctgctctacgtacgcctggtgctc
ggcggcagcgataccgacgatcccagcgccttttcccgcccgctgacgccgccggaaata
ctggtgatgacgttcaccaacgccgccacccaggagctgcgcgaacgcatccgccggcgg
ttggtggaagccgccgaggcgtttcttgcggaaggggacgacagcgcccacgattcgctg
cttctcgagctgcgcgcgcagtatccgcgcagcgtctggaccgcctgcgcccgccgcctg
gcgcttgccgccgaatggatggacgaagccgcggtatcgaccattcacagctggtgctac
cgcatgctgcgcgagcacgccttcgacagcggcagcctgttctcgctggagcttgagcac
gaccagcaagagctggagctggaagtcgtgcgcgactactggcgctgcttttactacccg
ctggacgccgacagcctggggcagatcagcggcttctgggcttcgcccgaggcgctgcac
gaaagtctcaaaaagctgctggccgacagcgaggcgctgccttgtccgccgcctcccggc
gcgattctcaaacgcgcgcgggagagtcgcgcgcgcatgctggccgagctgaaagccccc
tggccggccatgctcgacgaaatcgaaccgacgctggaacaggccgatgtggataatgct
tttcaacgagccaaactgaaaaagaactggcggaaaacctggctcggcgcgctgcgcgaa
tgggccgaaagcgacgccgaccgtcccgacctgaaaaaaggctgggaacgcctgactccg
gacggcatgcgagacatctggaaagacggcgatccccctttcccggaagcctgggccgct
gttgaggcgctgcccgccgcgcttgcccagctgcccaggccatacgccgaactgctcgcc
cacgccgtgcactggtgccgagcgcgccttgagcgcgaacaggagcgccgagcggaaatg
gggcccactgagctgctcacccaccttgaccgcgcgctcaagggacccaaccgccaagcg
ctggccgagcagattcgccgccagttcccggtggcgctgatcgacgagtttcaggacacc
gacccggtacagtaccggctgttcaacgccgtctacgacgtcgccacccccgccgaggat
cgcgccatcatgctcatcggcgatcccaagcaggccatctacgcctttcgcggagcggat
atcttcacctacctccaggcccgggaagacaccgccggacgccacgttaccctgggcaag
aacttccgctccacccaggccatggtcgaggcggtcaaccactgctttgcctatgccgac
cgtcacgccggcggcgcttttctgttccgcgacggcgacggcagcagcgacgacgacagc
ccgctgccgtttattccggtgcgcgcccgggggcggccggagcggctgaccctcgacggc
gagacccttagcgccatgacgctctggcacctggacagcgacgacggcaagccgctgggc
aagggcgagtatcaagacgccatggccgacggctgcgccagccacatggtccgtctgctc
aacgccggccagcggcggcaggcgggctttgagggcgacgacggcctcacgccgctcagg
ccgtcggacatggcggtgctggtcaacaacggcaccgaagccgggctgatccgcgatgcg
cttgcccggcgcggggtcaaaagcgtctatctatcggacaaggacaaggtcttcagctcg
cccatggccgcccaggtggcgcgctggctcgccgcctgcagcgagcccctggcaagctcc
cgccaggcccagagccggctgcgcgccgcgctcgccaccccggcgctggggcttgatctt
gcggacctcgagcatctggcccgcgacgagctggcctgggaaaagcagatcgagcgcttc
ggcgactaccaccgcctctggcagcgccaaggcgtgctgccgcttttgcgccggatgatg
gtggactttgccatccccgcccgcctgctggcccaaagaggcgccggcgacagcggcgag
cgtcagctcaccgatcttttgcacctgggcgaacttttacagcaggcaagccaggagctc
gacggcgagcacgcgctgctgcgctttcttcacgaagccatggccgacccggacggctac
ggcgacagccaccggctgcgcctggaaagcgacgccgacctggtcaaagtggttaccatt
cacaaggccaaggggcttgagtacccgctggtgtttctgccgtttatcgccaaccaccgg
cctaccaaggcgaccgacacaccgctgcgctggcacgccgccgacggcacgccgcgcctg
agccttgcccccgacgaggctgtgctcgccgccgccgaccgcgagcgcctgggcgaagac
atgcgcaagctctacgtggcgctgactcgtgccagccacgccgtctggctgggacttgcc
ccgctgggcgacatggacgcgcgcgccgtgggccacctgctgggcggccagcccgtggaa
gacggcgggctggaagcgctggtcgaaggtagcgacattgcgctgaagcccgcccccgaa
gccagtgacgaatgctttgtgccgccggccggcaacgccgcgcttgcctcggcgcgcacc
ccggcccgccacgctaaagaacactggtggatcgccagctattcggcgctggcgctgtcc
ggggcgctgacccgccccgccgacatgccgcccgcggccgccgagccggccaccgcgcgc
gaggccacggcgcttgaagtgctggacgagcctcgggacgacaaggcagagactgacagc
gcccacctgcaccgcttcccccgcgggcccggccccggcacctttttgcacgggcttctg
gagtgggccggccgcgaaggctttgccgccgcgctcagcgacggcgaagcgcttgacgat
accctgcgccgacgcctgcagctgcgcggctggcagcgctggcatggcgtgctgacccac
tggctgagtgagcttgtcgccgcttcgctgccgctgccagcgccggaaggcgccggcgct
tcgaccgttgcgctcaccgagcttggcgactaccaggtggagctggaattctggttcgcc
gccgatcaggtcgacacccgcgagctggaccgcctcgtctgcacccacctgatgcccggc
atcgagcgcccggcccttgagcgcgacaccctcaacggcatgctcaagggctttatcgac
ctggcctttgcccaccaggggcgcttttacgtgctcgactggaagtccaactacctgggc
cgggacgacgccgcctacggcactgaggccatgcgccgagcggtgctggacaagcgctac
gacgtgcagtcggcgctgtacctgctggccatgcaccggctgctcaaggcgcgtctgccg
aactacgatccggcccgccacctgggcggggcgatgacggtatttctgcgcggcagccgc
acgccgtcccggggcgttcacgccgcgcccgcttcggcggcgctggtaggcgctctggac
aatctgttttcccccgacgccactcgccaggaggccggtcgatga
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