Halomonas piscis: P1P91_06890
Help
Entry
P1P91_06890 CDS
T09638
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hpis
Halomonas piscis
Pathway
hpis02020
Two-component system
hpis02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P1P91_06890
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P1P91_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpis03021
]
P1P91_06890
Transcription machinery [BR:
hpis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P1P91_06890
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
HTH_AraC
HTH_23
LacI
Motif
Other DBs
NCBI-ProteinID:
WNK21393
LinkDB
All DBs
Position
complement(1481612..1483018)
Genome browser
AA seq
468 aa
AA seq
DB search
MAMKASLQLRVGTQLTMTPQLRQAIGLLQLPTLDLRQEVQQAVEANPLLEQEDEFDEQTA
VEPAEDGWAEQIPDELAVDSDWSDTYPDTQQTAGEGPDFERQAAGQTLHGHLLWQLAMLD
LTPDDRLTGEALIDAVDANGYLTQPLDAIGDGLEDQQGKPVGAERLERMLDRLQQFDPTG
VFARDLGECLSLQLDALPGTTPLLMPARRLARQFLTALGRGDRRLLKRRLGLDDAGLDEV
IKLIKSLDPRPGSAFDSAGSGQVLPDLLARRSEDGWQLELNPEALPQLRIQPDYAALIQK
ADSSRDNSFLKEHLQEARWLIKSLASRNDTLLRVGREIMARQLDFLDHGEAAMKPLVLAD
IAEAVGMHESTVSRVTTQKFLHTPRGVFELKYFFSSQLTGDDDSAHSSTAIRARIKQLIE
QEPPAKPLSDSRLAALLDEAGIRVARRTVAKYREALGIPSTSERRRRS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaaagcgtctctccagctacgcgtcggtacccagctgaccatgacgcctcag
ctccgccaggccatcggtttactgcagctgccgacgctggacctgcgccaggaggtccag
caggcggtggaggccaaccccctgctcgagcaggaagacgagtttgacgagcagaccgcc
gtcgagcccgccgaagacggctgggccgagcagatccccgacgagctcgccgtggacagc
gactggtccgacacctacccggacacccagcaaaccgccggcgagggccccgacttcgag
cgccaggccgccggccagactcttcacggccacctgctctggcagctggccatgctcgac
ctgacgcccgacgacaggctcaccggcgaggcgctgatcgacgccgtggacgccaacggc
tacctgactcagccgctggacgccataggtgacggccttgaggatcaacagggcaagccc
gtcggcgccgagcgccttgaacgcatgctcgaccgcctgcagcagttcgacccgaccggc
gtctttgctcgggatctgggcgaatgcctctccctgcagctggatgccctgcccggcacc
acgccgctgctgatgcccgcccgccggctggcgcggcagtttctcaccgcccttggccgc
ggcgacagacgcctgctcaagcgccggctgggccttgacgacgccgggctcgacgaggtc
atcaagctgatcaaaagcctggatccgcgccccggcagcgcctttgacagcgccggcagc
ggccaggtactgcccgacctgctcgcccggcgcagcgaggacggctggcagctcgagctc
aaccccgaggcactgccgcagctgcgtatccagcccgactacgccgcgctgatccagaag
gccgacagcagccgggacaacagcttcctcaaggagcacctgcaggaggctcgctggctg
atcaagagcctcgccagccgcaacgatacgctgctgcgcgtcggccgcgaaatcatggcc
cgccagctcgatttcctcgaccacggcgaggcggccatgaagccgctggtgcttgccgat
attgccgaggcggtgggcatgcacgaatccacggtttcccgggtgacaacgcagaagttt
ctgcatacgccccgcggcgttttcgagctcaagtactttttctccagccagctcacaggc
gacgatgacagcgcccactcgagcaccgccattcgcgcccgcatcaagcagctgatagag
caggagccgcccgccaagccgctgtccgacagccgtctcgccgcgctgctcgacgaagcc
ggcatccgggtggcccgccgcaccgttgccaaataccgcgaggccctgggcataccatcc
accagcgaacggcgccgccggagctga
DBGET
integrated database retrieval system