Halomonas piscis: P1P91_07400
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Entry
P1P91_07400 CDS
T09638
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hpis
Halomonas piscis
Pathway
hpis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P1P91_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpis03019
]
P1P91_07400
Enzymes [BR:
hpis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P1P91_07400
Messenger RNA biogenesis [BR:
hpis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P1P91_07400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNK21486
UniProt:
A0ABY9Z445
LinkDB
All DBs
Position
1578339..1579613
Genome browser
AA seq
424 aa
AA seq
DB search
MSESEKSTQDATARKPKRRRRKPRRRQSGWDLRQFKVPAVAGKWRFHDFDLPLPLMRGIQ
AQGFEYCTPIQAETLRHTLLGGDILGKAQTGTGKTAAYLISILAYFLEEKAPDGQKLRAP
RALIVAPTRELTLQIEKEARGLARYTHLYVTSAVGGTDYQQQREQLDRKVDLLVATPGRL
LDFQQKGELDLAQTEVLVLDEADRMLSMGFIPDVERIIPHMPNRDERQTWLFSATFSEDI
RALAEQWAQSPAEVRIQADADSQADVDQRVYQVADADKPQLLVALLQREGVERAIVFGNR
RDRIRELEDELQKAGISAGVLSGDVAPDERITTLDQFREGKLQVLVATDVAGRGVHIDDV
SHVVNYTLPEDPEDYVHRLGRTGRAGARGTLISLAGEEDTFSLPEIERYTGDRLPREQPP
EGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaaaagagcacacaagacgcgacggcgcgaaagcccaagcgccgtcgc
cgcaagccgcgtcgtcgccagtcgggctgggaccttcgccagttcaaggtgcccgccgtt
gccggcaagtggcgctttcatgactttgacctgccgctgcccctgatgcgcggcatccag
gcccaggggtttgagtactgcacgccgatccaggcggaaaccctgcgccatacgctgctg
ggcggcgacatcctgggcaaggcgcagaccggtaccggcaagacggcggcttacctgatt
tcgattctggcctactttctggaagagaaagccccggacggacagaagctccgggcgccc
agagcgctgatcgttgcccccacccgggagctgacgctgcagatcgaaaaggaggccagg
gggctggctcgctatacccacctgtacgtgacaagcgcggtgggcggtaccgactaccag
cagcagcgcgagcagctggatcgaaaagtcgacctgctggtggccaccccggggcgcctg
ctggatttccagcagaagggcgaactggatcttgcccagaccgaggtgctggtgctggac
gaggccgaccgcatgctctccatgggctttattcccgacgtcgagcgcatcatcccgcac
atgccgaatcgggacgagcgccagacctggctgttttcggccactttcagcgaggatatc
cgggccctggccgagcagtgggcgcagtccccggccgaggtacgcattcaggccgacgcc
gacagccaggcggacgtcgatcagcgggtttaccaggtcgcggacgccgacaagccgcag
cttctggtcgcgcttttgcagcgggaaggcgtcgagcgggccatcgtgttcggcaatcgc
cgggaccgtatccgcgagctcgaggacgagctccaaaaggccggtatcagcgcgggagtt
ctctccggcgatgtggccccggacgagcggatcaccaccctggatcagttccgcgaaggc
aagcttcaggtgctggtggcgaccgacgtcgccgggcgcggtgtccacattgacgacgtc
agccacgtggtcaactacacgctgccggaagaccccgaagactatgtccaccgcctcggg
cgtaccggccgggccggcgccaggggtacgctgatcagcctggccggcgaagaagatacc
ttctcgctgcccgaaatcgaacgctacaccggcgacaggctgcctcgcgagcagccgccg
gaaggcctgctctag
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