Haemophilus pittmaniae: NCTC13334_00184
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Entry
NCTC13334_00184 CDS
T06001
Symbol
mutM
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13334_00184 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_00184 (mutM)
Enzymes [BR:
hpit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC13334_00184 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC13334_00184 (mutM)
DNA repair and recombination proteins [BR:
hpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13334_00184 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
DUF7573
Zn_ribbon_8
Zn_ribbon_TiaS
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
SNV61161
LinkDB
All DBs
Position
1:complement(195962..196777)
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AA seq
271 aa
AA seq
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MPELPEVETALRGVSPYLKGFTIENIVIRQANLRWPVSAELAQLKHVKILALTRRAKYLV
IHTEQGYIIGHLGMSGSVRIVSQDSPPDKHDHLDIVMNNGKVMRYNDPRRFGAWLWTNNL
ANFHLFAKLGPEPLADEFNAEYLFKKSRGRRIPVKSFLMDNAVVVGVGNIYANESLFYCR
LHPQKLAANLTHKQCERLVLVIKAELTRAIEQGGTTLKDFLQPDGRPGYFAQELQIYGKA
GKPCPVCGHVIESLIIGQRNSFVCPHCQKKA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagttgaaacggccctacgcggagtcagtccttacttaaaaggc
tttacgattgaaaatatagtgattcgtcaggcgaatctacgctggccagtgtcagctgaa
ttggctcaacttaagcatgtgaagattttagcgctgacgcggcgcgctaaatatcttgtc
attcatacggagcaggggtatatcatcggtcatttaggcatgtcgggctctgtgcgtatt
gtgtcgcaggatagtccaccggataagcacgatcatttagatattgtaatgaataatggc
aaagtgatgcgctataacgatccacgtcgtttcggtgcatggttatggacgaataactta
gctaattttcatttatttgctaagcttggaccggagccacttgccgatgaatttaatgcg
gagtatttatttaaaaagtcccgtgggcggcgaattccagtaaaatcctttttaatggac
aatgccgtggttgttggggtaggcaatatttatgcgaatgaaagcttattttactgtcgc
ctgcatccgcaaaaactagccgctaatcttacccataaacaatgtgaacgcttagttttg
gtcattaaagctgaattaacccgagctattgagcaaggaggcacgaccttaaaagacttt
ttgcaaccggatgggcgtcctggatactttgcacaagagttgcaaatttacggtaaagca
ggaaaaccttgtccagtttgtggtcacgtgattgaaagtttgattatcgggcaacgcaat
agctttgtatgtccacattgtcaaaagaaagcatag
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