Haemophilus pittmaniae: NCTC13334_00235
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Entry
NCTC13334_00235 CDS
T06001
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13334_00235 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpit03019
]
NCTC13334_00235 (pnp)
03016 Transfer RNA biogenesis [BR:
hpit03016
]
NCTC13334_00235 (pnp)
Enzymes [BR:
hpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC13334_00235 (pnp)
Messenger RNA biogenesis [BR:
hpit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC13334_00235 (pnp)
Transfer RNA biogenesis [BR:
hpit03016
]
Prokaryotic type
tRNA degradation factors
NCTC13334_00235 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
SNV62411
LinkDB
All DBs
Position
1:248802..250934
Genome browser
AA seq
710 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKEVKEGQDFFPLTV
DYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFLNEIQIIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGVARVGFINDQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADVLSEEQMLSAVVFGHQQQQVVVEAIKEFAREAGKPRWDWTAPAVDTD
LINKVKAIAEARLGDAYRITEKQSRYEQIDAIKADVIAQITAENEEVSEGKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQILDELTGERQDHFLFHYNFPPYSVGETGRIGSPKRREIGHGRLAKRGVAAVMPTLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALKQAKGARMHILGVMEQAI
PAPRAEISDFAPRIHTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAAVD
NNAAKAVMARIDEITAEVEAGAIYKGKVTRLADFGAFVAIIGNKEGLVHISQIAEERVEK
VSDYLQVGQEVDVKVVEIDRQGRIRLTMKELAPKQTAEEVVETDNDTTAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgttaaacagtttaaatacggtcaacacaccgtgacactagaaaccggc
gcgattgcccgtcaggcgacggcagccgtaatggcaagtatggatgacaccaccgttttt
gtaacggttgtcgccaaaaaagaagtaaaagaaggtcaggatttcttcccattgaccgtt
gattatcaagaacgcacttacgcagccggtaaaatcccaggcggtttctttaaacgtgaa
ggccgcccttctgaaggcgaaaccttaatcgcccgtttaatcgaccgtccaattcgtccg
ttattcccggaaggttttttaaacgaaattcaaattatcgccactgtagtttccgtcaat
ccacaaattagtccggatttagttgcaatgatcggtgcttctgcagcactttctctttct
ggcgtgccatttaacggcccgattggtgttgcccgcgttggtttcatcaacgatcaattc
gttttaaacccaaccatggcggaacaaaaacaaagccgcttggatttagtggttgcaggt
accgacaaagccgtattaatggttgaatccgaagccgatgtattaagtgaagagcaaatg
ctttccgcagtagtattcggtcatcaacaacaacaagttgtggttgaagccattaaagaa
tttgcccgtgaagcaggtaaacctcgttgggattggactgctccagcagttgatactgac
ttaatcaataaagtgaaagcgattgccgaagcccgtcttggcgatgcttaccgtattacc
gaaaaacaatcccgctacgaacaaattgatgctatcaaagcagatgtcatcgcacaaatc
actgcagaaaatgaagaagtcagcgaaggtaaaatcgttgatatctttaccgcgttagaa
agccaaattgtacgtggccgcattattgccggtgaaccgcgtattgacggtcgtaccgtg
gataccgtgcgcgctttagatatttgtaccggcgtattaccacgcacccatggttccgct
atcttcacccgcggtgaaactcaagcccttgccgtggctactttaggtacagaacgtgat
gcacaaattttggatgaattgaccggtgaacgccaagatcacttcttgttccactataac
ttccctccgtactctgtaggtgaaaccggtcgtatcggttcgccaaaacgtcgtgaaatc
ggccacggtcgtctggctaaacgcggtgttgctgctgtaatgccaaccttggctgagttc
ccttatgtggtacgtgttgtttctgaaatcaccgaatccaatggttcctcttctatggct
tctgtttgtggtgcttccctcgcattaatggatgctggtgtgcctatcaaagcagcggtt
gcaggtattgcaatgggcttagtgaaagaaggcgataaattcgttgtactttctgacatc
ttaggtgatgaagaccacttaggtgatatggactttaaagtagctggtacccgtgaaggt
gtgactgcactacaaatggatattaagatcgaaggtattacgccggaaatcatgcaaatc
gcgttaaaacaagcgaaaggtgctcgcatgcatattcttggcgtgatggaacaagcgatt
ccggcaccgcgtgctgaaatctctgattttgcaccacgtatccacaccatgaaaatcgat
ccgaagaaaatcaaagatgtaattggtaaaggtggtgctactattcgtgcacttaccgaa
gaaaccggaacatctatcgatatcgatgatgacggtacagtaaaaatcgcagctgtggat
aacaacgcagctaaagcggtaatggcacgtatcgatgaaatcaccgctgaagtagaagct
ggtgccatctataaaggtaaagtcactcgcttagccgatttcggtgcattcgtggctatt
attggtaacaaagaaggcttagttcatatttcacaaattgccgaagagcgcgttgagaaa
gtcagcgactatttgcaagtcggccaagaagtggatgtaaaagtggttgaaatcgaccgt
caaggccgcattcgtttaaccatgaaagaacttgcaccaaaacaaaccgccgaagaagtt
gttgaaaccgacaacgacactaccgcggaataa
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