Haemophilus pittmaniae: NCTC13334_00495
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Entry
NCTC13334_00495 CDS
T06001
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03030
DNA replication
hpit03430
Mismatch repair
hpit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13334_00495 (holB)
03430 Mismatch repair
NCTC13334_00495 (holB)
03440 Homologous recombination
NCTC13334_00495 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpit03032
]
NCTC13334_00495 (holB)
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_00495 (holB)
Enzymes [BR:
hpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13334_00495 (holB)
DNA replication proteins [BR:
hpit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13334_00495 (holB)
DNA repair and recombination proteins [BR:
hpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13334_00495 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
SNV66355
LinkDB
All DBs
Position
1:complement(488796..489776)
Genome browser
AA seq
326 aa
AA seq
DB search
MSELYPWLAATYDKISQTFTESLGHHALLIKTDQGLGAESLFDSLAKRIMCQTPENAPCG
HCHSCHLMSAHSHPDFHLLASQEGKDIGVDQVRAINEIVAQHAQQNGNKLVYIQGAERLT
EAAANALLKTLEEPRPNTYFLLQTEPSSSLLATIYSRCQVWNVPVPTESEALTWLSSQFQ
AETSELLTALAMNLGRPLLALETLQQGFIEQRKNFLRQFWLFYRRRSPLEILPFFEKECA
VQQMDWILAFLGDAIKYKLEIQSGWQILDLKNGVMQFADEQTVLGLLSANKIMQKVRSDL
LTINGVNTEIILLDGLTKLITDVFKD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctttatccttggttagcggccacttatgacaaaatcagccaaacctttaca
gaaagtttgggacaccatgctttgttaattaaaaccgatcaagggctgggcgcagaaagc
ttatttgattctttggcaaaacgtattatgtgtcaaacgccagagaatgccccctgtggc
cattgtcattcctgccatttaatgagtgcccatagtcatcctgattttcatctcttagcc
tctcaagaaggcaaggatatcggggtggatcaggtgcgggcgattaatgaaattgtagct
cagcatgcacagcaaaacggcaataagttggtatatatccaaggcgcagaacgcctcact
gaagcggcggctaatgcgttattaaaaaccttggaagagccgcgtccgaacacgtatttc
ttattacaaacggaaccctcctcttcattgttggcaaccatttacagtcgttgccaagta
tggaatgttcctgtgccgacagaatctgaagccttaacttggctttcttctcaatttcag
gcagaaacatcagaattattgactgcacttgcgatgaatttggggcgtccgctgttagca
ttagaaacactccaacaaggatttattgaacaacgcaaaaatttcctacgtcaattttgg
ctgttttatcgtcgtcgttcgcctttggaaattttgcctttctttgaaaaagagtgtgca
gtacaacagatggattggatcttggcttttttaggtgatgccattaaatataaattagaa
attcaaagtggttggcaaattcttgatcttaaaaacggagtaatgcaatttgctgatgaa
caaactgtgcttgggctattaagtgccaataaaattatgcaaaaagtgcgttcggattta
cttaccattaatggtgttaataccgaaataatcctattggatggtttaacgaagttaatt
accgacgtgtttaaggactaa
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