Haemophilus pittmaniae: NCTC13334_00734 Help Entry NCTC13334_00734   CDS       T06001                                  Symbol rpoB Name (GenBank) RNA polymerase subunit beta   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism hpit  Haemophilus pittmaniae Pathway hpit03020   RNA polymerase Brite KEGG Orthology (KO) [BR:hpit00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     NCTC13334_00734 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hpit03021]     NCTC13334_00734 (rpoB)    03400 DNA repair and recombination proteins [BR:hpit03400]     NCTC13334_00734 (rpoB) Enzymes [BR:hpit01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      NCTC13334_00734 (rpoB) Transcription machinery [BR:hpit03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      NCTC13334_00734 (rpoB) DNA repair and recombination proteins [BR:hpit03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       NCTC13334_00734 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 SPG4 CDIF630_02480-like Motif Other DBs NCBI-ProteinID:  SNV69075 LinkDB All DBs Position 1:716038..720066 Genome browser AA seq 1342 aa AA seqDB search MGYSYTEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQKDPDGQQGLEAAFRSVFPIV SNNGYTELQYVDYRLEEPEFDVRECQIRGSTYAAGLRVKLRLVSYDKESSSRAIKDIKEN EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLFNARIIPYR GSWLDFEFDPKDNLYARIDRRRKLPATIILRALGYTTEEILDLFFDKVIYEIADNKLLMT LVPERLRGETASFDIVADGKTYVERGRRITARHIKALEKDKVTQVEVPTEYIVGKVAAKD YVDLESGEIVCPANGEISLEVLAKLAQAGYKTIETLFTNDLDYGPYISETLRVDPTYDRI SALYEIYRMMRPGEPPTPESSEALFNNLFFSAERYDLSAVGRMKFNRSLSIPEGVGTGTL SNDDIIRVMKKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS LGDLDAITPQDLINPKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR ERAGFEVRDVHNTHYGRLCPIETPEGPNIGLINSLSAFARTNDYGFLETPYRKVIDGQVT EEIEYLSAIDEANYIIAQANSNLDENNRFTDAFVTARGERGESGLYKPEDIHYMDVSTQQ VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAK RGGTVQYVDASRIVIKVNEDETVAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINR GEVLADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCV ARDTKLGSEEITADIPNVGESALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEE KLLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKD LSDELEILEAGLFARVRNVLIAGGIDAAQLDKMDRTKWLEQTISDEEKQNQLEQLAEQYE ELRKEFEHKLEVKRKKIIKGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKI NPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAKGIGDQINAMIKQKQDVE KLRGYMQKAYDLGHGAQKVDLSTFSDDEIMRLAENLRKGLPVATPVFDGADEQEIKEMLK LGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVGGNQQMDPGTP ESFNVIMKEIRSLGLNIELDEE NT seq 4029 nt NT seq  +upstreamnt  +downstreamnt atgggttactcctacactgagaaaaaacgaattcgtaaagacttcggcaaacgtccgcaa gttttaaatgtcccttatttattaaccattcaattagactcattcgataaatttattcaa aaagatcctgatggtcagcaaggtttagaagctgcattccgttcagtattcccaatcgtg agcaacaatggttataccgaacttcaatatgttgattatcgcttggaagagccggaattt gatgtgcgtgaatgccaaatccgtggttctacttatgcggcaggtttacgcgtaaaactt cgtttagtgagctacgataaagaatcttcttcccgtgccattaaagacattaaagaaaac gaagtttacatgggtgaaatcccattgatgaccgataacggtacctttgtaattaacggt actgagcgtgttattgtttcacaattacaccgtagtccaggcgtatttttcgattctgac aaaggtaaaacccattcttccggtaaggtgttatttaatgcacgtattattccttaccgt ggttcttggttggatttcgaatttgatccaaaagataatttatatgcacgtattgaccgt cgccgtaaattaccggcaactattattttgcgcgctttaggctataccaccgaagaaatt ttagatttgttcttcgataaagtgatctatgaaattgccgataataaattgttaatgacg ttggttccagaacgtttgcgtggtgaaaccgctagcttcgatatcgttgctgatggtaaa acctatgtagagcgtggtcgtcgcattactgctcgtcatattaaagctcttgagaaagat aaagtgactcaagtggaagtaccaacggagtatattgttggtaaagtggcggcaaaagat tatgtagatttagagtctggtgaaattgtttgtccggcgaacggtgaaatttccttagaa gtattggctaaattagctcaggctggttataaaacaatcgagaccttattcactaacgat ttagattacggcccttacatttctgaaaccttacgtgtggatcctacctacgatcgtatc agtgcgttatacgaaatttatcgtatgatgcgtccgggtgaaccaccaacaccagaatct tccgaggccttatttaataatttattcttctctgcagaacgttacgatttatctgcagtt ggccgtatgaagtttaatcgttctttaagtattcctgaaggtgttggtacaggtacttta agtaatgacgatattattcgagtgatgaaaaaactcatcgacatccgtaatggtcgtggt gaagtagatgatatcgaccacttgggtaaccgtcgcattcgttcagtgggtgaaatggct gaaaaccaattccgcattggtttggtacgtgtcgaacgcgcggtgaaagagcgtttatct ttaggtgatttagatgctatcactccacaagatcttattaaccctaaaccgatttctgcg gcagtgaaagaattctttggttcttcacaactttcgcaattcatggatcaaaataaccca ttatcagaagtgacgcacaaacgtcgtatttcagcattaggtccaggcggtttaactcgt gaacgtgccggctttgaagtgcgtgacgtacataacacccactatggtcgtttatgtcca atcgaaacacctgaaggtccaaacatcggtttgatcaactcactttctgcatttgctcgt acgaacgattacggtttcttagaaaccccatatcgcaaagtgattgatggtcaagttact gaagaaatcgaatatctatctgcgattgatgaagcgaactacatcattgcacaggcaaac tcaaaccttgatgagaacaaccgctttaccgatgcgtttgtaactgctcgtggtgagcgc ggtgaatctggtctttataaaccggaagacatccattatatggacgtttcaactcaacaa gtggtatccgttgcagcggcattaattccattcttagagcatgatgatgcgaaccgtgcc ttaatgggtgcgaacatgcaacgtcaagcggttccaactttacgtgctgataagccgtta gtgggtacaggtatggaaaaaccaatcgcacttgactcaggtgtggcggttgtagcgaaa cgtggtggtactgttcaatacgttgatgcttctcgtatcgtcatcaaagtaaatgaagac gaaaccgtagcaggtgaagcgggtatcgatatttataacttaattaaatacacccgttct aaccaaaacacttgtatcaaccaaattccttgtgtgaatttaggcgatccaattaatcgt ggtgaggttttggcagatggtccgtcaactgacttaggtgaattagcattaggtcaaaat atccgtgtggcattcatgccttggaacggttataacttcgaagactcaatgttagtttct gagcgtgtagtacaacaagaccgcttcacgacaatccacattcaagaattatcttgtgtg gcacgtgatactaaattaggttctgaagaaatcactgcggatattccaaacgtaggtgaa tctgcattaagcaaattggatgaatccggtatcgtgtatgtgggtgctgaagtaaaaggt ggcgacatcttagttggtaaagtaacccctaaaggcgaaacgcaattaacaccagaagaa aaattgttacgtgcaatcttcggtgaaaaagcatctgatgtgaaagactcttcattacgc gtaccaaacagcgtaagcggtactgtaattgacgttcaagtcttcacccgtgatggcgta gaaaaagacaaacgtgcattagaaattgaagaaatgcagttaaaacaagctaagaaagac ctttctgatgaattagaaatcttagaagctggcttgtttgctcgtgtgcgtaatgtactt atcgctggcggtattgatgcggctcaattagataaaatggatcgcacaaaatggttagaa caaaccatttcagatgaagaaaaacaaaatcaattagaacagcttgctgaacaatatgaa gagttacgtaaagagtttgaacacaaacttgaagtaaaacgtaagaaaatcattaaaggc gatgacctcgctccaggcgtgttgaaagtggttaaagtttacctagcggtgaaacgtcaa atccaaccgggtgataaaatggcgggtcgtcacggtaacaaaggtgttatctcaaaaatc aaccctgtggaagatatgccatacgacgaaaacggtcaaccggttgaaatcgtattgaac ccattgggcgtaccatctcgtatgaacatcggtcagatcttagaaacccacttaggctta gcagcgaaaggtatcggtgatcaaatcaatgcgatgatcaaacaaaaacaagatgttgag aaacttcgtggctatatgcaaaaagcatatgacttaggtcatggtgctcaaaaagtagat ttaagcacctttagcgatgatgaaatcatgcgtttagcggaaaacctacgcaaaggttta ccggtagcaacaccagtgtttgatggtgctgatgagcaagaaatcaaagaaatgttgaaa ctaggtggcttaccaacttcaggtcagatcaccttatatgatggtcgtacaggtgagaaa tttgagcgtccagtaaccgtaggttatatgtatatgctcaaattgaaccacttagttgat gacaaaatgcatgctcgttcaaccggttcttatagtcttgttactcagcaaccacttggt ggtaaagctcaattcggtggtcaacgtttcggtgagatggaggtatgggcacttgaagca tatggtgcagcttacaccttacaagaaatgctaaccgtgaaatccgatgatgtgaacggc cgtacgaagatgtataaaaacatcgtcggcggtaaccaacaaatggatccgggtacaccg gaatctttcaatgtaatcatgaaagaaatccgttcacttggtttgaatatcgagttagac gaagagtaa

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