Haemophilus pittmaniae: NCTC13334_00922
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Entry
NCTC13334_00922 CDS
T06001
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13334_00922 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpit03019
]
NCTC13334_00922 (recQ)
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_00922 (recQ)
Enzymes [BR:
hpit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13334_00922 (recQ)
Messenger RNA biogenesis [BR:
hpit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13334_00922 (recQ)
DNA repair and recombination proteins [BR:
hpit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13334_00922 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Hanta_Gn-B
PTSIIA_gutA
HEM4
Motif
Other DBs
NCBI-ProteinID:
SNV71444
LinkDB
All DBs
Position
1:complement(909016..910878)
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AA seq
620 aa
AA seq
DB search
MSAEDASVTNPNSSTALTVLRSVFGYQSFRKGQAEVIDAALRGQDALVVMATGNGKSLCY
QIPALCFDGLTLVISPLISLMKDQVDQLQTNGVAADFLNSSQTPEQQQQVQNKLMSGQLK
LLYVSPEKVMTHSFFQFIAEAKISFIAIDEAHCISQWGHDFRPEYSQLGGLKNAFPQAPI
MALTATADYATRQDILTLLHLQSPHQYIGSFDRPNIRYTLQEKFKPMEQLLRFVQAQKGK
SGIIYCNSRNKVERIAESLRHKGIAAAAYHAGMEIAVREKVQQDFQRDNIQVVVATIAFG
MGINKSNVRFVAHFDLPKSIESYYQETGRAGRDDLPAEAVLFYEPSDYAWQQKMLLEKPE
TPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCQNCDICLDPPKKYNGLIDAQ
KVMSTIYRVGQCFGAQYVIAVLRGMHNQKITERGHESLSVFGIGKDKSKEHWQSVIRQLI
HLGFIQQVLSDFNHATLQLTESAKPVLKGEIELELALPRISAISQLTRAPQHRTANYDKD
LFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYLPCSNAEMLQINGVGQIKLDRFGQA
FLHLIREHKAILAQAEKQPA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaagacgcctctgtcaccaatcctaactcatcgaccgcattaacggtattg
cggtcggttttcggctaccagtcattccgtaaaggccaggctgaagttatcgatgccgca
ctacgtggccaagatgccttagtggtcatggcaaccggcaatggcaaatccctctgttat
caaatccccgcgctctgttttgatggtttgaccttagtcatctctccgctgatctcactt
atgaaggatcaggtagatcagctacaaactaatggcgtagcggcagattttctgaattcc
agccaaacacccgaacaacagcaacaggttcaaaataaactcatgtcggggcagcttaaa
ctgctgtatgtatcgccggaaaaggtgatgacccatagtttttttcaattcatcgctgaa
gctaaaatcagctttatcgcgattgacgaagcccattgtatttctcaatggggacatgat
ttccgccctgaatacagccaactgggcgggctaaaaaacgcctttccacaggcgccaatt
atggcactcaccgccaccgccgactatgcaacccgtcaggatattctcaccctgctccat
ttgcagtcaccccatcaatatatcggtagttttgaccgtccgaatatccgctacacgctg
caggaaaaatttaaaccaatggagcaattgctgcgctttgttcaggcacaaaaaggcaaa
agtggcattatttattgcaatagtcgtaacaaagttgaacgcattgcggaaagcttgcgc
cacaaagggattgccgccgcggcctaccatgccggtatggaaattgcggtacgcgagaaa
gtacaacaggattttcagcgcgataatattcaggttgtagtggcgactatcgcctttggt
atgggaataaataaatccaatgtgcgctttgttgctcatttcgatttgccgaaaagcatt
gaatcctattatcaggaaactggccgtgccggacgtgatgacttgccggcggaagcggtg
ctgttttacgaaccctccgactacgcctggcaacaaaaaatgctattggaaaaaccggaa
actccacaacgacaaatcgaacaacataaactggaagccatcggcgaatttgccgaaagc
caaacctgtcgtcgtttagtgttgctaaactacttcggcgaacatcgccaaaccccttgt
caaaactgcgatatttgtttagatccaccgaaaaaatacaatggcttgatcgatgcacaa
aaggtcatgtcaaccatttatcgggttggccaatgctttggggctcaatatgtaattgcg
gtattgcgcggcatgcacaatcaaaaaatcaccgaacgtggccatgaaagcctttcggtg
tttggtattggcaaagacaaaagcaaagaacattggcaatcggtgatccgccagctaatt
cacttaggttttatccagcaagtgctgagtgatttcaaccatgcaacgctgcaattaacc
gaaagtgccaaacctgtgctgaagggtgaaatcgaattggaattggcactaccgcgtatt
tctgcgattagccaattaacacgcgcaccgcaacatcgcaccgccaattacgacaaggat
ctgttcgcccgtctgcgttttctgcgtaagcaaatcgccgacaaagaaaatatcccaccc
tatatcgtcttcaacgatgccaccttgcaggaaatggctcaatatttgccatgctccaat
gctgaaatgctacaaattaacggtgtcggccaaatcaaattggatcgcttcggccaagcc
ttcttacatttaatccgcgaacacaaagctattctggcacaagcggaaaaacaaccggca
taa
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