Haemophilus pittmaniae: NCTC13334_01049
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Entry
NCTC13334_01049 CDS
T06001
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13334_01049 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpit03019
]
NCTC13334_01049 (rhlB)
Enzymes [BR:
hpit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC13334_01049 (rhlB)
Messenger RNA biogenesis [BR:
hpit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13334_01049 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
SNV76596
LinkDB
All DBs
Position
1:complement(1049567..1050820)
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AA seq
417 aa
AA seq
DB search
MQENYLSRQRFADLPLHPIVQQALQAKGFEFCTPIQALSLPFSLQGKDVAGQAQTGTGKT
MAFLTATFHHLLTHPQNAQGQPRALILAPTRELAVQIAHDAETLEKISGLKTALAYGGDG
YDKQLKAIEAGVDILIGTTGRVIDYVKQGVIRLEQIQVVVLDEADRMFDLGFIRDIRYLL
RKCPPPQARLTMLFSATLSYKVRELAFEDMNEPEYIEIEPEQKTGHRIKEELFYPSNQDK
IPLLLTLMEEEWPERCIVFANTKHKCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFT
DGELDILVATDVAARGLHIPDVTHVFNFDLPDDREDYVHRIGRTGRAGESGVSISFACEQ
YAMNLPAIEEYIGHSIPVSQYDPASLISDIPKPYRLKRAVPNNRNNGVNNHRPYRKH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattatttaagtcggcaacgcttcgccgacctgccgttgcaccccattgtg
caacaggcattacaagccaaaggattcgaattctgtacaccgattcaagcactttcccta
ccttttagtttacagggcaaagatgtagctggtcaggcgcaaaccggtaccggcaaaacc
atggcatttttgaccgcaacattccatcacctattaacccatccacaaaacgctcaaggc
caaccgcgcgctttaatcttggctccaacccgtgaattagcggtgcaaatcgcccacgat
gcggaaacattggagaagatcagcggactgaaaaccgccttagcctacggcggtgatggt
tatgataaacaactgaaggcaatcgaagccggcgtggatattttaatcggtaccaccggg
cgggttatcgattatgtgaaacaaggtgttattcgtttagaacaaattcaagtggtggtg
ctagatgaagctgatcgcatgttcgatttgggctttattcgtgatattcgctatctgcta
cgcaaatgtccgccccctcaagcacgccttaccatgctcttttctgccaccctgtcctat
aaggtgcgcgaactggcctttgaagatatgaatgagccggaatatatcgaaatcgaaccg
gagcaaaaaaccggtcatcgcattaaggaagagctgttctatccatccaatcaagacaaa
atcccactattactcaccttaatggaagaagaatggccggaacgctgcattgtgtttgcc
aataccaaacataaatgtgaagacatttggggctatttggccgctgatggacatcgtgtg
gggttgttaaccggggatgtggctcagaaaaaacgactatcactactgaaacaatttacc
gatggtgaattagatattttagtagccaccgatgtggctgcgcgcggtttgcatatcccc
gatgtgacccacgtatttaactttgatttacccgatgatcgggaagactatgtgcatcgt
atcgggcgcaccgggcgggcaggtgaaagcggcgtttcaattagttttgcctgcgagcaa
tatgcgatgaatttaccggctatcgaagagtatatcggtcattccattccggtcagtcaa
tatgatccggcatcgctgattagtgatattcccaaaccctaccgtctaaaacgggctgta
ccaaacaaccgtaataacggcgtcaataatcatcgtccttatcgtaaacattaa
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