Haemophilus pittmaniae: NCTC13334_01389
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Entry
NCTC13334_01389 CDS
T06001
Symbol
dnaX
Name
(GenBank) DNA polymerase III/DNA elongation factor III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03030
DNA replication
hpit03430
Mismatch repair
hpit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13334_01389 (dnaX)
03430 Mismatch repair
NCTC13334_01389 (dnaX)
03440 Homologous recombination
NCTC13334_01389 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpit03032
]
NCTC13334_01389 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_01389 (dnaX)
Enzymes [BR:
hpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13334_01389 (dnaX)
DNA replication proteins [BR:
hpit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13334_01389 (dnaX)
DNA repair and recombination proteins [BR:
hpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13334_01389 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
ResIII
AAA_16
AAA_2
AAA_18
AAA_lid_RFC1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
SNV81177
LinkDB
All DBs
Position
1:1402885..1405008
Genome browser
AA seq
707 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQQHVLAALENGLRENRLHHAYLFSGTRGVGKTSIARLFAK
GLNCVHGITAEPCGECENCKAIEAGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALDD
KQISAHLHKILTAEQIPFVDAALDKLAKAAQGSVRDSLSLTDQAIAMGNGKIELETVNAM
LGLLDENQPLEIIYALHQGNGERLMKTIQTVADKAGDWDELLTETAEKLHQIALLQLLRN
ASQDENDHLAFLAKHMAPEDVQFFYQVIVSGRQELNAAPNRRIGAEMTLLRALAFHPKFL
TAAPKANPQRVQPISTPPDNSAEAIEMRVLSQNIKATYSSQQTQKTARSVPPPQALSATS
TSSGNLDLPAFAALQALNHLSAMEQAERQEQKAAEAQALQQSRQQLEALEVAQQQKSSGL
TELPIIKMTPPKKRPQATVRVQAEVPESFSRLQNTMEDNQDMAEEEQEIEQQECLDAETY
RWEWSNPELAKFDSGVRPSEIKQAILQGITPELRDKIIAITQVQDPWTDWVERCGISGFS
KELALNCFLLSQDENTLNLGLHSDKVHLRQTRNIEALAGALSRFLEKPLQLNVQLDDSDV
RTPMDYRQATYRELSDKAREALQQDKKILLLQKEFAAVLDVESIRPV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtgttggcccgtaaatggcggccacaaacctttgccgatgtggtggga
caacagcatgtgttggccgcattggaaaatggcttaagggaaaatcggctacatcatgcc
tatcttttttccggaacccgtggcgtcggtaaaacctcgattgcccgtttgtttgctaag
ggcttaaattgcgtgcacgggatcaccgccgagccttgcggagaatgtgaaaattgtaaa
gccattgaagcgggtaacttcattgatttaatcgaaatcgatgcggcttcccgtactaaa
gtggaagacacccgagaattattggacaacgtacaatataagccggtagtcggtcgttat
aaggtgtatctgatcgatgaagtgcatatgttgtcacgtcattcgtttaacgcgctatta
aaaaccctggaagagccaccggaatatgtcaaatttctactggctacaacggatccacaa
aaattaccgattaccattctttcgcgctgtatgcagtttcatctaaaagccttggatgac
aaacaaatcagtgcccatttgcataaaattttgactgcggagcaaatcccatttgtggat
gcggctttggataaattagccaaagcagcgcaggggagtgtgcgtgacagtttaagcctc
acggatcaagccatcgctatgggcaatggcaaaattgagttggaaaccgtaaatgccatg
ctcggtttattggatgaaaatcagccccttgagattatttatgccttgcatcaaggtaat
ggcgaacggttgatgaaaaccattcaaacggttgccgataaagcgggcgactgggatgaa
ttactgaccgaaacggcagaaaaactgcaccaaatagcgctattacaattgttgcgtaat
gcttctcaggatgaaaacgatcatttggcttttttagctaagcatatggctccggaagac
gtacaatttttctatcaagtgattgtcagcggtcgtcaagaattaaatgccgctccaaat
cgccgtatcggtgcggaaatgacgttattgagggcgttggcattccacccaaagttcctt
acggcagcacccaaggctaacccgcaaagggttcagcccatttcaactccgccggataat
tctgcggaagctattgaaatgcgggtgttgtcgcaaaatatcaaagcaacctattcctcc
caacaaacccagaaaactgctagatcagtgccaccacctcaagcactgagtgcaacctca
acctcttcaggtaatttggatttgccggcctttgccgcgttgcaagcgcttaatcattta
tcggcaatggaacaggcggagcgccaggaacaaaaggcggcggaagcacaggcgttgcaa
caaagtcgtcagcagttggaagccttggaggttgcgcaacaacaaaaatcctccgggtta
accgagctgccgattatcaaaatgacgccaccgaaaaaacgcccacaagcaacggtgcgc
gttcaagctgaggtaccggaaagtttttcccgcttacaaaataccatggaagataatcag
gatatggcggaggaagaacaggaaatcgagcaacaggaatgcctggatgccgaaacctac
cgttgggaatggagtaatcctgaattggctaaattcgatagcggtgtgcgtccatcggaa
atcaaacaggcgattttgcagggcattacgccggaattgcgggataaaattattgctatc
acgcaggttcaagatccttggactgattgggtggaacgttgtggtattagcggctttagc
aaagaattggcgctgaattgctttttgctgagtcaggatgaaaatactcttaatctcgga
ttgcattccgacaaggtccatttgcgccaaacgcggaatattgaagccttggccggagcg
cttagccgttttctggagaaacctttgcaattaaacgtgcaattagatgattctgatgtg
cgtactccgatggattatcgccaagcgacctatcgcgaattaagtgataaggcacgcgaa
gctctccaacaggataaaaagatcctgttgttgcaaaaggaatttgctgctgttttggat
gttgaaagcatccgtcccgtataa
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