Haemophilus pittmaniae: NCTC13334_01471
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Entry
NCTC13334_01471 CDS
T06001
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hpit
Haemophilus pittmaniae
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpit03016
]
NCTC13334_01471 (rnd)
Enzymes [BR:
hpit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC13334_01471 (rnd)
Transfer RNA biogenesis [BR:
hpit03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC13334_01471 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
SNV82721
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All DBs
Position
1:1497487..1498641
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AA seq
384 aa
AA seq
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MIKEVQTAAPYVLIENDQALAECCWQAMQQSVVALDTEFVRVSSYYPHLGLIQLYDGNQV
SLIDPLCISDFGPFVELLTAPAVTKVLHACSEDLLVFLQEFDVLPEPMLDTQIMARFLGF
SSSMGLAKLVQHYLGLEIDKGATRTNWLKRPLSPAQLQYAAGDVWYLLPIYQQMRQALQQ
TPWLEAVYDDCRLALMKTTKLDDKNPELAYLDIPNAWKLNPLELARLQLLAKWRLETAMQ
RDLAQSYVVKAESLWKVVKHNPHNTSEMLSLGLTESEVRVRGKKMLQLLAAARKIKPYDY
PPRIARLVDEPNYKRAMRLLQEKAFELTPQGLTLEILASKRSLEDLLRWAWKTPRNQDKL
PDLLIGWRRAIGLKLLDALDAMAK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaagtgcaaaccgccgcgccttatgtattgattgagaatgaccaggcattg
gccgaatgttgttggcaggccatgcaacaaagtgtcgttgccttggatacggagtttgtt
cgggtatccagttattatcctcatttggggctgattcaattatatgatggaaaccaagtc
agccttattgatcccctgtgtattagcgattttggtccttttgttgaactgttgacagcg
cctgcggtaacaaaggtgctacatgcctgtagcgaggatctgttggtgtttttacaggag
tttgatgtattacccgaaccaatgttagacactcaaattatggcgcgctttttaggtttt
tcctcctccatgggattggccaaactggtgcaacattatcttggcttggaaattgataag
ggagcaacccgtaccaattggctcaaacggccgctttcaccggcccagttgcaatatgcg
gcaggggatgtttggtatttattgccgatttatcaacagatgcgccaagcgttgcagcaa
acaccatggcttgaagcggtttatgatgattgccgtttggcattgatgaaaaccactaaa
ttggacgataaaaatcctgagctggcgtatttggatataccgaatgcctggaaacttaat
ccgcttgaattggcgcgtttacagttacttgccaaatggcgtttagaaacggcgatgcag
cgggatttagctcaatcctatgtggtgaaagcggaaagtttatggaaagtcgttaaacat
aatccacacaatacctcggaaatgttgagtctggggctgacggaaagtgaagtacgggtg
cgcggcaagaaaatgctgcagttgctggcggctgcccgcaagatcaaaccttatgattat
ccgccacgaattgctcgtttagtggatgagcccaattacaagcgagcgatgcgcttattg
caggaaaaagctttcgagctcaccccccaagggcttacactagaaattctggccagtaag
cggagcttggaggatcttctacgttgggcttggaaaacgccgcgcaatcaggacaaatta
cccgatttattgattggctggcgacgggcaatcggccttaaactacttgatgctctagat
gcaatggcaaaatag
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