Vreelandella piezotolerans: GYM47_00040
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Entry
GYM47_00040 CDS
T07036
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz00541
Biosynthesis of various nucleotide sugars
hpiz01100
Metabolic pathways
hpiz01250
Biosynthesis of nucleotide sugars
Module
hpiz_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GYM47_00040 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpiz01005
]
GYM47_00040 (rfaD)
Enzymes [BR:
hpiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GYM47_00040 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpiz01005
]
Core region
GYM47_00040 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
MAX_effector
DUF6716
Motif
Other DBs
NCBI-ProteinID:
QJA22623
LinkDB
All DBs
Position
10289..11245
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AA seq
318 aa
AA seq
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MIVVTGGAGFIGANIVKALNARGRDDVMVVDDLRDGTKFVNLADCTLADYLDKDDFIARV
KAALRGETVDLPTIDAIFHEGACSDTTEWDGHYMMENNFEYSKVLLNYCEKLGIPFLYAS
SAATYGGSEVFKEAPEHEKPLNVYGYSKLLFDQHVRSRWNELTTQVVGFRYFNVYGPREQ
HKGKMASVAYHNHLQIRNGETLKLFGAYGGYEAGMQSRDFVYVGDVVDVNLWFLDNPHAS
GIFNLGTGRAEPFKAIGEAVIDFYGQGEIDYIPFPQELKGRYQSYTRADISQLRAAGCDV
EFKTVAQGVKAYLEWLNG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtaacaggcggggccgggttcatcggcgccaatattgtcaaagcgctaaat
gctcgcggccgtgacgatgtgatggtggtcgacgacctgcgcgatggcaccaaattcgtc
aatttggcggactgcacgctggctgactacttggataaagacgatttcatcgcccgcgtg
aaagccgcgctacgtggtgaaacggtggacttgcccaccatcgatgcgattttccatgaa
ggggcctgttcggacaccaccgagtgggacgggcactatatgatggagaataacttcgag
tactccaaagtgctgctcaactactgtgaaaaactgggcatcccttttctgtacgcatcg
tcggcggcgacctacggtggcagcgaggtgttcaaggaagcgccggagcatgagaagccg
ctcaacgtctacggctactccaagctactgttcgatcagcacgttcgctcgcgctggaac
gagttgacgactcaagtggtaggtttccgctacttcaacgtttacgggccgcgagagcag
cacaaaggcaagatggccagcgttgcctatcacaaccatctgcagatccgtaacggcgaa
acgctgaagctgttcggtgcttacggtggctatgaggcgggcatgcagagccgcgacttc
gtctacgtgggcgatgtggtcgatgtgaatctctggtttttggataaccctcacgcatca
ggcatcttcaatttgggcaccgggcgtgccgagccgttcaaggcgattggcgaagcggtc
atcgatttttacggtcagggcgagatcgattacattcccttcccccaagagttgaaaggg
cgctaccaaagctacacgcgtgctgatattagccaactgcgtgcggcaggttgtgacgtg
gaattcaaaaccgtcgcccagggcgtcaaggcgtacttggagtggttgaatggctaa
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