Vreelandella piezotolerans: GYM47_02325
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Entry
GYM47_02325 CDS
T07036
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM47_02325 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_02325 (recD)
Enzymes [BR:
hpiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GYM47_02325 (recD)
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM47_02325 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_28
PhoH
AAA_16
TraI_hel_assoc_N
AAA_5
AAA_25
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QJA23022
LinkDB
All DBs
Position
complement(501699..503756)
Genome browser
AA seq
685 aa
AA seq
DB search
MNTLHLSDNESLLTTLFDWARAGWIRDLDAAFADQLARLAPEADGPCLLAAAMVSHLAGQ
GHLLLDLKTLTKQPRSLIAVQAQEAMPELPTPDAIIARYADTGWEQALRAWSAVGTGTNG
NEPLVLVGSTLYLRRYWQHEQRITAAVNARLEHVTDWPSDQAASLLSRLFPPDVPHADDV
RWQKMACAIGARAPFAVITGGPGTGKTTTVIRLLALLQGLTRLANQPALTIALAAPTGKA
AARLNESIAQQVAALNDIELPYGTQQSVPTEVKTLHRLLGARPDTRHYAYHAHRPLPYDM
VVVDEASMVDIEMMAALLDALPSHARLVLIGDKDQLASVEAGSVLGSLCQRADEGHYSDP
TAQWITATTGYTLDTSLTNSSGQALDQAVAKLRHSFRFDSQSGIGHLADAINAGNAKQAN
AVLADARYQDLAHLSLSATAPYHKLTTLAVAGRKNNPHARGLSHYLQCIQQTDTRPGLED
DKSAWDDWAATILKAHSTFQLLTPLRQGPWGVETLNERIEQALIRGGWIDASAAESHWYE
GRPVLVTGNDYGLKLMNGDIGITLNSPRHFTTSTKTVPKEENGLTLRVAFPDGQGGIRWV
LPSRLQRIETVYAMTVHKSQGSEFSHTALVMPDSLSPILTRELIYTAVTRAKHTFTLLDT
HSEVLTRAIERRIERYSRLFAVSDQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctgcacttatcggataacgaatccttactgaccacgcttttcgactgggca
cgcgcggggtggattcgcgatctcgatgcagcgttcgctgaccagctagcacggcttgcg
ccagaggccgatggcccctgcttgctagcggcggcgatggtcagccatttagccgggcaa
gggcatctcttgctcgatctgaaaacgttaaccaaacagccccgctcgctgatcgctgta
caagctcaggaagccatgcccgagctgcccacacccgacgcaattattgcccgttatgca
gacaccggctgggaacaagcattacgggcttggtcggcggtgggcaccggcactaacggc
aatgagcctcttgtactggtcggctccacgctctatctgcgccgctattggcagcacgag
cagcgcatcaccgcggcagtgaacgcgcgccttgagcacgtgaccgattggcccagcgat
caggctgccagcctgctgagccgtctgtttccgcctgatgtacctcatgcggacgatgta
cggtggcaaaaaatggcgtgtgcgattggcgcgcgcgccccctttgctgtgattaccggt
ggccctggcacaggaaaaaccaccacggtcattcgtctgctggcgcttctgcaagggtta
acgcgtctcgctaaccagcccgcgctgacgattgcgctggcggcaccgacgggtaaggca
gccgctcggctcaacgaatcgattgcccaacaggtggctgcgctgaacgatattgagctc
ccttacggcacacagcagtccgtgcccacggaggtcaaaacactgcaccgcttactaggt
gcccgcccagatacgcgccactatgcctatcatgctcaccgcccgctgccttatgacatg
gtggtggtggacgaagcttctatggtggatatcgaaatgatggcagcgctattggatgcg
ctgccctcccacgctcgactggtgttaattggcgataaagatcagctggcttcagtcgaa
gccggatccgtattaggcagtttgtgccaacgcgctgatgaggggcactacagcgaccct
accgctcaatggatcaccgccaccacgggttacacgctcgacacttccttgacgaactct
tcaggccaggcgctggatcaggcggtcgccaagctgcgccacagctttcgctttgatagc
caaagtggcatcgggcacctcgccgacgccatcaacgcaggcaatgccaagcaggcgaac
gccgtactggcagacgcccgctatcaagaccttgcccacctatcgctgtcagcaaccgcg
ccctaccacaaactaacgacattagcggtcgcaggacgaaaaaataaccctcacgcacgc
ggccttagccactacctgcagtgcattcagcaaacagacacccgccctggcctagaagac
gataaatccgcctgggacgactgggcggccactattctcaaagcccacagcacgttccag
ctgttaacaccgctgcgccaagggccgtggggtgtggaaacgctcaatgagcgtattgaa
caggcactgatacgtggaggatggattgatgcctcagcagctgaaagccactggtatgaa
ggccgcccagtattagtcaccggtaacgactacggcttaaaactgatgaatggggatatc
ggcattaccctgaactcaccgcgtcactttacgaccagtactaaaacagtacccaaagag
gagaacgggttaacgctgcgtgtagcgttccccgatggccaaggcggtattcgctgggtg
ctgcctagccgcttgcagcgcattgaaacggtttacgcgatgactgttcacaagtcgcag
ggctcggagtttagccataccgcgctggtgatgccggattcactctcgccgatactcacc
cgagaattgatttataccgccgtgacgcgggctaagcatacgtttacgttactcgacacc
cacagtgaggtgctaacacgcgcgattgaacggcgcattgagcgctacagccgcctattt
gccgtttcagaccaatag
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