Vreelandella piezotolerans: GYM47_02335
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Entry
GYM47_02335 CDS
T07036
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM47_02335 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_02335 (recC)
Enzymes [BR:
hpiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GYM47_02335 (recC)
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM47_02335 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJA23024
LinkDB
All DBs
Position
complement(507511..511188)
Genome browser
AA seq
1225 aa
AA seq
DB search
MAAYSAPNAHEKRTQGLIVLQGNRMEDLRDVTMAWLAHRPLHPLEKTTFLVQSNGIAQWL
KISMAETQGGVGRGISLGADVMLPARFQWQAYRQVIDAATGDNSVPKSSPFDKGQLRWQI
LTILPDMLKDPRFEPLARYLEEDPDTRKRYQLAERIADLFDQYQVYRADWLTAWEQGDDI
LTQGFLDSAARQQPLDDEHLWQPTLWRLLGDTIAERLGEEARHSHRGAIHQRFKTAANEL
SQRPEGLSPRIVVFGISSLPLQMIEVLAALSPLSEVILCLLNPCKHYWGDIIETRDALRR
HHRQRRKQGMPADLHATPEALHLHAHPLLAAWGKQGRDYLHLLSEYDATEQYQDAFTALQ
QSVDCFVTPDTRYLLGQLQDDLLDLRPVAESQSRWPALSATDRSITFTVCHGPQRELEVL
HDQLLAAFGEDASLQPRDIIVMVPNINDYAPYIEAVFGQFSPHERRYLPYHLADQQRRHR
EPLLVALETLLTLPQRRFRTSEVLELLDIPPLRHAFGLEESDLPTLQRWVRDTNIRWGLN
AQQRASLDLPEHDELHTWRFGLERMLMGYAIGAPAETGDDWEGIVPFDEVAGLDARIAGS
LYRLISALEDYRERLDTSQSADDWSAVLGQLIITFLAPTSPREEQLLGHVQTTLDAWQQE
IHDAQMDLSINLAVVRESWLSRIDEPQLAQNFIVGRITFATLMPMRAIPFRHVYMLGMQE
GAYPRKSQAPDFDLMAIRGHYRPGDRSRRDDDRYLFLEALLSARERLVISWCGFSAQDNQ
EQPPSVLVGQLRDHIAAGWRLAAQDTPARLSADEREKQRRSLLATLTVEHPLQPFGHAYF
DKTSPLFTYAREWQGVRSTTSGPSLLQVSASLPLWQPESTVTLSALASFMRDPVSALFQQ
RLATSMRDDHTTSEDDEPFDFDSLEKWQQRDAILQYLGQRLTSDRNADIDLLFQETVDTR
QRAGHYPPSPVGPLVQHALLEHLPDTLSAYQTLLRRYPDAAHPVVSVSHAAEITPNTLAP
FQHTQPVHITLSDTLDNVFCSETETARIVLLSSHLHQGNSWHWNQIMRHWPAHLALQLTH
PESSTHLVSPSGTLAIPGFPKAQAAEWLDRLIRQWFSAMQAPLPTHSSLAFTLFEYAPDG
VDPLDIEALCQNEKLVEEWEKAFDKLSQRSPMTVRELPTLEDFLSNDQFLTTCQDVYRDL
YDWVAELTATEHPTAEHPDTEQEAR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctactctgctcctaatgcccatgaaaaacgaacccaaggccttattgtcctt
cagggcaaccgcatggaagatctgcgtgatgtcacgatggcgtggctagcccaccgcccc
ctgcatccgctggagaaaaccacgtttctcgtacaaagcaacggcattgcccaatggctg
aagatttctatggccgagacgcagggtggagtaggcagaggcatcagccttggcgcagat
gtcatgctgccagcgcgcttccagtggcaggcttaccgccaagtgattgacgccgcgacg
ggtgacaacagcgtgcccaaaagctcgccctttgataagggccagctacgttggcagatc
ctcactatattgcccgacatgttaaaggatccccgctttgagccactggctcgctatctt
gaggaggatccggatacacgcaagcggtatcagttagccgaacgcattgccgatctgttc
gatcagtatcaggtctatcgcgcagactggctaacggcctgggagcaaggcgatgacatc
ctcacgcagggttttttagatagcgcagcacgccaacagccgttagacgatgagcactta
tggcaacctacgctatggcgcttactgggtgacacgattgctgagcgcttgggggaggag
gctcgccatagtcaccgcggcgcgatacatcagcgctttaaaacggcggcgaacgaactc
tctcaacgaccagaaggcctctcccccagaatcgtagtgtttggcatttcatccctgccc
cttcagatgatagaagtgcttgccgcgctttcgccgctatcggaagtgattttgtgtctg
ctcaatccttgcaagcactattggggcgatattattgagacgcgagatgcactgcggcgc
catcatcgacagcgtcgtaaacaaggcatgcctgccgatttacacgcgacaccggaagcg
ttgcatctacatgcgcatccgctgctggccgcctggggaaagcaggggcgtgattaccta
cacctgctcagcgaatacgacgcgacagaacagtatcaagacgcctttacggcgctccaa
cagtccgttgactgctttgtcacaccggatacgcgttatttattgggccagttacaggat
gaccttttagatttacggccggtggctgaaagccagagccgctggccagcactgagcgcc
acggatcgttcaatcacctttacggtctgtcatgggccgcagcgcgaactggaagtgctc
cacgaccagctgttagcggcctttggggaggatgcctcgctacagccacgcgatattatc
gtcatggtgccgaacatcaacgactatgccccgtacattgaagccgtattcggccagttt
tcgccccatgaacgccgctacctgccctatcatcttgccgaccaacagcgccgccaccgc
gagcctctcctagtcgcgctcgaaacgttattaacgctaccacagcggcgctttcgcacc
agcgaagtgttggagctccttgatatcccaccattacggcatgcctttgggcttgaagag
agcgacctccccacccttcagcgctgggttcgtgacaccaatatccgctggggactcaat
gctcagcaacgcgcttcactcgatctgccggagcatgacgagttacatacgtggcgcttt
ggtcttgagcgcatgctcatggggtatgccattggagcccctgctgagaccggcgatgac
tgggaaggcattgtgccgtttgatgaagtggccggcctagatgcacgcattgccggctca
ctttaccggctcatttccgcccttgaggactatcgagagcgcttggatacctcacagtca
gcggacgactggtcagcggtattaggccaactgatcattaccttcttagcgcctacttct
ccacgcgaagaacagctgttagggcacgtgcaaaccacgttagacgcgtggcagcaagag
atccacgacgctcaaatggatctgtctattaacttggccgtggtacgcgagagctggctg
tcgcgtatcgatgaacctcagctggcacaaaattttatcgtggggcgaatcacctttgcg
acacttatgccaatgcgcgcgatccccttccgccacgtgtatatgttgggtatgcaggaa
ggcgcctaccctcgtaaaagccaagcacccgactttgacctcatggccattcgcggacac
taccgtccgggtgaccgctcacgacgtgacgacgatcgatatttgttcctcgaagcgttg
ttgtcagcacgcgagcgtctagtgattagttggtgtggttttagcgcacaagataaccaa
gaacagccgcctagcgtgctagtggggcaactgcgtgatcatattgccgctggttggcgg
ctagcagcgcaggacacgccagcgcgtttatccgccgatgagcgcgaaaaacagcggcgt
agcctgctggccaccttaaccgtagagcatccacttcaaccctttggtcatgcgtatttt
gataaaacctcgccactgtttacgtatgcccgcgagtggcaaggcgtccgctcaacaacc
tctgggccctcattgttgcaagtctctgcctcgctaccgttatggcaaccagaaagcacg
gtgacgctgagtgccctggccagctttatgcgcgatcccgtgagtgcactgtttcagcag
cggctagcaacgtccatgcgtgacgatcacacgacgagtgaagacgacgaaccgtttgac
tttgactctcttgaaaagtggcaacagcgcgacgccatattgcagtatctaggccagcgc
ctcaccagcgatcgaaatgccgacattgatcttctttttcaagaaacagtcgacacacgc
cagcgcgcaggccactacccgccttcaccggtaggccccctcgtgcaacatgcattgtta
gagcatttgcctgacaccctctccgcctaccagacactgctgcgtcgctatcctgacgcc
gcccacccggtggtctcggtgtctcacgctgcagagatcacacctaacacgctagcgcct
tttcaacacactcaaccagtgcatatcaccctaagcgatacgctggataatgtgttctgt
agcgagacggaaacagcacggatcgtattactttccagccatctgcaccaaggtaacagc
tggcattggaaccagatcatgcgccactggccagcacatctagcgctacagctcacccac
ccagaatcatcaacgcacctggtatcaccaagcggtaccttggccatacccggctttccc
aaagcccaggcggcagagtggttggataggctaattcgtcaatggtttagcgccatgcag
gcgccattacccacgcattcttcactggcatttacgctatttgaatacgcacctgatggc
gttgacccactcgatatagaggcgttatgccaaaacgaaaagctagtggaggaatgggaa
aaggctttcgacaagctctcgcagcgaagtcctatgacagtgcgtgagttacctaccctg
gaagattttttatctaacgaccagtttttgactacttgccaggatgtttaccgtgacctc
tacgactgggtagccgagctaacagccactgagcatccaaccgctgagcacccagatact
gaacaggaggcacgctaa
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