Vreelandella piezotolerans: GYM47_04350
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Entry
GYM47_04350 CDS
T07036
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpiz01002
]
GYM47_04350
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpiz01011
]
GYM47_04350
Peptidases and inhibitors [BR:
hpiz01002
]
Cysteine peptidases
Family C82
GYM47_04350
Peptidoglycan biosynthesis and degradation proteins [BR:
hpiz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GYM47_04350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QJA23396
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Position
951938..953569
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AA seq
543 aa
AA seq
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MNDHQPLRRWAIGAALCLALSGPIMADANEPASAALQQALAQHLQHHEGSLPIASFYELR
GGQPAWQELQRVQSLVSALNTLPDDGLTPDDYQASSLLSDFQQSQQLDDRAKANFDVRAT
RALLLALDHLSIGKVDPKRVEPNWDLQRPERRYALPRVVQAVEEGRVEQALSLARPNMAA
YAQLREALVHYRRLADQMSVPYLPRRDESLRPGDIDDDVQTLRQRLTLWGEPHLLAADSS
AYPMVDVQASGADPRSFDRELAQAVMRFQRRHQLQEDGVVGERTRLALNMPVSARVNQLR
INLERARWIRPSLERTPNVWVDIAGYRLHYTRPNGQHWDTRVVVGSPSRETPIIHSSISH
LTVNPSWTIPPTIMREDVLPRIRQDEQYLARQNIQVVSLSGETLDASTIDWQRPGGVMLR
QVAGSSNPLGRVVVRFPNNDMIYLHDTPARGLFQREHRALSSGCVRVEGVTEFAQLLLQD
SGSRYQLDTLIANGRSDQNVNLPNRIPVALHYLTAWPNGQGDVVFREDIYHRDAALLAAL
EAV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccaccagccactaagacgatgggcgataggagcggcgctctgtctggcgctg
agcggcccgataatggccgatgccaatgagccagccagcgccgcgttgcagcaagccctc
gcgcagcatcttcaacaccatgaagggtcgctgcccatcgcgtcgttctatgaactgcgc
ggtgggcagccggcgtggcaagagcttcaacgcgttcagtcgctggtcagcgcgttgaac
acgttgcccgatgacgggttgacgcccgacgactatcaagcctcgtcgttgctgagtgac
ttccagcaaagccagcaattggacgatcgtgcgaaggccaatttcgacgtgcgagccact
cgggccctgctcttggcgttggatcatctatcgatcggtaaagtggatcctaaacgcgtc
gagccgaattgggatctgcagcgacctgagcggcgttatgcgctgccacgtgtagtgcaa
gccgtcgaggaggggagggtcgagcaagcgctgtcactggcgaggccgaatatggcggcc
tatgcccagcttcgtgaagcgttggtgcactatcgtcggctggccgatcagatgagcgtg
ccctatttaccaagacgcgatgagtcgctgcgccccggcgatatcgacgatgacgtgcaa
acgcttcgccagcgcttgacgctatggggcgagccccacctgctggcagcagatagtagc
gcttaccccatggtcgacgtgcaggcgtcaggagctgaccctcgcagcttcgaccgagag
ttagcgcaagcggtcatgcgttttcagcgacgccaccagttgcaagaagatggcgtagtg
ggagagcgcacacggctggcactgaacatgcccgtctccgcacgagtgaaccaactgcgc
atcaacctggagcgagcccgctggattcgcccttcgctggagcgcacgcccaacgtgtgg
gtcgatattgcaggctatcgcttgcattatacgcgccccaatggccagcattgggatacc
cgagtggtggtgggctcgcccagtcgtgaaacgccgatcatccactcctcgatcagccac
ttgaccgtcaacccaagctggacgatccccccgaccatcatgcgggaagatgtgctacca
cggatccgccaggacgagcagtatctggcgcggcagaacattcaggtagtgagcctatcc
ggagaaacgctggatgcgagcacgatcgattggcagcgtccgggaggcgtgatgcttcgc
caagtggcagggagcagcaatcctctgggacgtgtcgtggtgcgttttcccaataacgac
atgatttacttgcacgataccccggcaagagggctctttcagcgtgagcacagggcactg
agctctggctgtgtgagggttgagggggtaacggaatttgcccagctcctactgcaagac
agcggcagccgttatcagctcgatacgctgatcgcgaatggccgcagcgatcaaaacgtg
aacttgcctaaccgtattccggtagcgctgcactacctgactgcttggcccaacgggcaa
ggagacgtagtgttcagagaggatatctatcaccgcgatgcggcgctgctcgcagcgctc
gaagcagtgtaa
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