Vreelandella piezotolerans: GYM47_05005
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Entry
GYM47_05005 CDS
T07036
Name
(GenBank) PAS domain S-box protein
KO
K12146
hydrogenase-4 transcriptional activator
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpiz03000
]
GYM47_05005
Transcription factors [BR:
hpiz03000
]
Prokaryotic type
Helix-turn-helix
Other families
GYM47_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
AAA_5
AAA
Mg_chelatase
PAS_3
HTH_8
AAA_2
AAA_16
PAS_7
AAA_3
Cep57_CLD_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJA25937
UniProt:
A0A6H1YCG5
LinkDB
All DBs
Position
1079797..1081707
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AA seq
636 aa
AA seq
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MASHTPLAMIIVDPLSDSLIDANPAACHLLLLARDQTLTTPFSHRLSASLPLWVSFTDEV
LTTGQGWSDDLVLLDSARQPRRVEVYGQRLQSESQLLLTLIDRNKAEQRRAKAELSRQHR
QGEVGWQRVEQVFERIEKQNQLILSAAGEGIYGLDADGKTTFVNPAAERILGWSTEDMVG
HDAHLMFHHTHADGSHFPVQQCPIHASFSDGQVHHVDDEVFWHKNGEAIPVEYTSTPIFE
MGRLVGAVVLFRDIRERKRAEQQLRDALEEVESLKRRLELENQYLQEEIKAEVNHRNIVG
NSPAVAKLTQQIAMVAPTSANVLISGESGTGKELIARAIHAGSTRSDRPLIRVNCAAIPR
DLFESEFFGHVKGAFTGAVQDRPGRFELAHGGTLFLDEVGEIPLELQSKLLRVLQDQQFE
RVGDNRTREVDVRVIAATNRELKEMIDAGQFREDLYFRLNVFPIDSVPLRKRIEDVPLLA
RHFLHRACLKFNKPGVRIPPAQLDVLTRYPWPGNIRELENVIERQVIVTQDQRLSFDDLL
LVEPLSRHTAFNETSHDSSELPDHLLTEQALCHQQRCNALKALKAANGKVSGAGGAAELL
GMKPTTLTSRLQKWGIDPRQYRRRQRKSTSANDALD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccagccatacgccgctggccatgatcatcgtcgatccgcttagcgattccctgatc
gatgccaaccctgccgcctgccacttgctgctcctagcgcgtgatcaaaccctcaccacc
cccttcagtcaccgcttgagcgcctcactgccgctatgggtcagctttaccgacgaggta
ctaacgaccgggcaagggtggtcggatgatttagtgctgctggatagcgcccgccaacct
cgtcgtgtcgaagtctatggccaacgcttgcagagcgaatcgcagctattgttgacgttg
atcgatcgcaacaaggccgaacagcgtcgtgccaaggccgagcttagccgacagcaccgg
caaggggaggtgggctggcagcgggtcgagcaggtgttcgagcgtatcgaaaagcagaac
cagctgattctcagcgcggccggggagggcatttacggcctggatgccgatggcaaaacc
accttcgtcaatccggccgccgagcgcattcttggctggagtacggaggatatggtgggc
cacgatgcgcatctgatgtttcatcatacccacgccgatggcagccacttccccgtccag
cagtgccctatccatgcctcgtttagtgatggtcaagtgcaccatgtggatgacgaagtg
ttctggcataaaaatggcgaggccattcccgtggagtacaccagcacgccgattttcgaa
atgggccgattagtgggagcggtggtcctgtttcgcgatattcgcgagcgtaaacgtgcc
gagcagcagctacgcgatgcgctagaagaggtggagtcgctcaaacgccgcttggagcta
gagaaccagtatctgcaagaagagatcaaagccgaagtgaaccaccgcaatatcgtcggc
aacagcccggcggtggccaagctgactcagcagattgccatggtcgcgccgaccagcgct
aacgtgctgattagcggcgagtcaggtactggcaaagaactgattgcccgggcaattcac
gcaggtagtactcgcagcgaccggccgttgatccgcgtgaactgtgccgcgattccccgc
gacctcttcgagagtgagttcttcggtcacgtgaaaggcgcctttaccggcgcggtgcaa
gaccgtccgggacgctttgaattggcccatggcggcacgctgttcctggatgaagtaggg
gaaatcccattagagctgcagagcaagctgctgcgcgtattgcaggatcagcagttcgag
cgggtgggggataaccgtacccgcgaagtggatgtgcgggtgattgcggcgaccaatcgt
gagttaaaagagatgatcgatgccgggcagtttcgcgaggatctctacttccgattgaac
gtctttcccatcgactccgttccactgcgcaaacgcatcgaagacgtgccgctgctggcc
cgccacttcttgcatcgcgcctgcctgaagttcaacaaacctggggtacgaataccgcct
gcgcaacttgatgtcctcacgcgttatccctggcccggcaatattcgcgagttggagaac
gtcatcgagcgtcaggtaatcgtgacgcaagatcagcggctctctttcgatgaccttttg
ttggtagagccactatctcgtcacacggcgttcaacgaaacgtcgcacgatagtagcgag
ttgcccgaccacctgctcaccgagcaagcgctgtgccatcagcagcggtgcaatgcacta
aaagcgttgaaagccgcaaacggaaaggtgtctggggcgggaggagcggctgagctgttg
ggcatgaagcccaccaccctcacttcgcgactgcaaaaatggggcatcgatcctcggcaa
tatcgcagacgccagcgcaaaagtacgtcagccaacgatgctttggactaa
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