Vreelandella piezotolerans: GYM47_05140
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Entry
GYM47_05140 CDS
T07036
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz00020
Citrate cycle (TCA cycle)
hpiz00640
Propanoate metabolism
hpiz00660
C5-Branched dibasic acid metabolism
hpiz00720
Other carbon fixation pathways
hpiz01100
Metabolic pathways
hpiz01110
Biosynthesis of secondary metabolites
hpiz01120
Microbial metabolism in diverse environments
hpiz01200
Carbon metabolism
Module
hpiz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hpiz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GYM47_05140 (sucD)
00640 Propanoate metabolism
GYM47_05140 (sucD)
00660 C5-Branched dibasic acid metabolism
GYM47_05140 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
GYM47_05140 (sucD)
Enzymes [BR:
hpiz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
GYM47_05140 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QJA23542
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All DBs
Position
1114181..1115053
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGGQGTFHSEQAIAYGTQMVGGVTPGKGGQTHLGLPVFNTVKEA
VEKTGAEASVIYVPAPFCKDSILEAANAGIKLIVCITEGIATLDMLDAKVKCDELGVRLI
GPNCPGVITPGECKIGIMPGHIHQPGRVGIVSRSGTLTYEAVKQTTDHGFGQSTCVGIGG
DPIPGSNFIDILEMFEKDPKTEAIVMIGEIGGTAEEEAAAYIKANVSKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAQIGDALKEVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctgatcgataagaacaccaaggtcatctgccaaggtttcaccggtggccag
ggcacgttccactccgagcaggcgattgcctatggcacgcagatggtcggtggtgtcacg
ccgggcaaaggcggccagacgcacctgggcctgcccgttttcaacaccgtgaaagaagcg
gtcgagaaaaccggtgcagaggccagcgtgatctacgtaccggcaccgttctgcaaagac
tcgatccttgaagctgcaaatgctggcatcaagctgatcgtgtgcatcaccgaaggcatc
gcgaccctcgacatgctcgacgcaaaagtcaaatgcgacgagctgggcgtacgcctgatc
ggcccgaactgcccgggtgtgatcactcccggtgagtgcaaaatcggtatcatgccgggt
cacatccatcagccaggccgcgtcggtatcgtgtctcgctctggtaccctgacctatgaa
gccgttaagcagaccactgatcacggtttcggtcagtctacctgtgtcggtatcggcggc
gacccgattccgggttctaacttcatcgacatcctggagatgttcgagaaagacccgaaa
accgaagcaatcgtgatgatcggcgaaatcggcggcaccgccgaagaagaagccgcggct
tacatcaaagccaacgtgtcgaagccggtggtttcctacattgccggcgtgacggcacct
cctggcaagcgtatgggccacgcgggtgccatcatctctggtggtaaagggactgccgat
gaaaaatttgcggctctagaagacgccggtgtcaaaaccgttcgttctttggcgcaaatt
ggcgatgcgttgaaagaagtcaccggctggtaa
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