Vreelandella piezotolerans: GYM47_05155
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Entry
GYM47_05155 CDS
T07036
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpiz03016
]
GYM47_05155
Enzymes [BR:
hpiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GYM47_05155
Transfer RNA biogenesis [BR:
hpiz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GYM47_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1822
Motif
Other DBs
NCBI-ProteinID:
QJA25939
LinkDB
All DBs
Position
complement(1117387..1119327)
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AA seq
646 aa
AA seq
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MLQNNSLLAQLKQQIRETTPRAEGVIKATEKGFGFLETDSGDSYFVPPPAMKQVLHGDRV
EAVIHENGDKKSVEPEKLIEAGLDRFVARVQKRDGRLAVVPDHPSIRNVLKARIKNSLDE
NSIGDGDWVVARLVRHPLKENDRGFFSQIDELVAKADDPAVPWRVTLARHALEQECPDAG
SDWPLRDEGLTREDLTAQPFFTIDGEKTRDMDDALYVVARPEGGWQLSVAIADPTAYVEE
GHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLWEGQERPALACTLTIHADGSLGDY
RFFAANVTSHAKLVYERVSDWIEGQGDWAPAEEIAEQLKALQALTEARTAWRNEHALVFK
DRPDYVFDLDEAGNVLGIRTEDRRIANRMIEESMIAANACCADFLASHIGHGIFNVHRAF
EPEKAEAAQEFLATQEIVVDQQALTELAHYKELKRALESRDDAWLDARLRRFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAQNQDTFDAEIMAINRGGMRVRLIENGATAFVPAPLMHSDR
DKVVIDDKEGRIQIEGEERFKLGDSLRVSLTEAREETRSLVAKPAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaacaactccctgcttgcccagctcaagcaacagatccgtgaaacgactcct
cgcgccgaaggggtgatcaaagctaccgaaaaaggctttgggtttcttgaaaccgacagc
ggcgactcctatttcgtgccacctcccgccatgaagcaggtactgcacggtgatcgcgtg
gaagccgtcatacacgaaaacggcgataagaagtcggtcgagccggaaaagctcatcgaa
gccggtttggaccgcttcgttgcacgtgtgcaaaaacgcgacggccgcctggcggtggtg
ccggaccacccttcgattcgcaacgtgttgaaagcacgtataaaaaacagcctcgacgaa
aatagcattggcgatggcgactgggtcgtggcgcgcttggtacgccacccactaaaagag
aacgaccgcggcttcttctcccagatcgatgagttggtggccaaagccgacgaccctgcc
gtaccttggcgcgtgacgcttgctcgccacgcgctggaacaagagtgcccggatgctggc
agcgattggccgctacgcgacgagggactgacgcgggaagacctcaccgcacagcccttc
tttaccatcgacggcgaaaagacgcgagacatggacgatgccctatatgtggtggcccgt
cccgaaggcggctggcagttgagcgtggccattgccgaccccaccgcctatgtggaagag
ggccacgccgccgatctggaagcgcgcactcgcgcatttaccgtctacctgccgggccag
aacgtcaccatgctgcccgagcagttggcggacgacttgtgctcgctgtgggaaggccaa
gagcgcccagcccttgcctgcacgctgaccattcatgccgacggcagcctgggcgactac
cgcttcttcgcggccaacgtgacgtcccacgcgaagctggtgtacgagcgcgtctccgac
tggatcgaaggccagggcgactgggcaccggccgaggagattgccgagcagctgaaggcg
ctgcaggccttgacggaagctcgcactgcatggcgtaacgagcacgcactggtcttcaaa
gatcgtcctgattacgtcttcgatctggatgaagcgggcaacgtgctgggcattcgcacc
gaagaccgccgcattgccaaccgcatgatcgaagagtcgatgattgccgccaacgcctgc
tgcgcggacttcctggccagccatatcggccacggcatcttcaacgtccaccgcgctttc
gagccggaaaaagccgaagcggcccaagagttcctcgccactcaggaaatcgtcgtcgat
caacaggccttgaccgaactggctcactataaggaactcaagcgtgcgcttgagagccgc
gacgacgcttggttggatgcgcgcctacgccgtttccagggcttcaccagcatgtcggcc
cagcctggcccgcattttgggctggggctgcccgcctacgccacctggacctcgccgatt
cgtaagtacggcgatatggtcaaccaccgcttgatcaagcgtgtgctcaagggcgagcag
gctccggcagaagccagccagcagctcaccgagcagctcaccgagcgccgccgtctgaat
cgtatggctgaacgcgacgtaaaagattggctttacgtgcgctacctgaccccggcggcg
cagaatcaggacaccttcgacgccgaaatcatggcgatcaaccgtggcggtatgcgggtt
cgtctgatagaaaacggcgcgacggcgttcgtgcccgcccccttgatgcacagtgaccgc
gataaagtggtcatcgatgacaaagagggccgcattcagatcgagggcgaggagcgcttc
aagctgggcgatagcctgcgtgtctcactgaccgaagctcgcgaagagacacgatcgctg
gtcgccaaacctgctgcctaa
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