Vreelandella piezotolerans: GYM47_05730
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Entry
GYM47_05730 CDS
T07036
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz00260
Glycine, serine and threonine metabolism
hpiz00460
Cyanoamino acid metabolism
hpiz00630
Glyoxylate and dicarboxylate metabolism
hpiz00670
One carbon pool by folate
hpiz00680
Methane metabolism
hpiz01100
Metabolic pathways
hpiz01110
Biosynthesis of secondary metabolites
hpiz01120
Microbial metabolism in diverse environments
hpiz01200
Carbon metabolism
hpiz01230
Biosynthesis of amino acids
hpiz01240
Biosynthesis of cofactors
hpiz04981
Folate transport and metabolism
Module
hpiz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GYM47_05730
09102 Energy metabolism
00680 Methane metabolism
GYM47_05730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GYM47_05730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GYM47_05730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GYM47_05730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GYM47_05730
Enzymes [BR:
hpiz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GYM47_05730
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QJA25946
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Position
1249948..1251261
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AA seq
437 aa
AA seq
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MLQNNFSPRARLAQYDTLLAEAMTEETARQEAHIELIASENYTSKVVMEAQGSQLTNKYA
EGYPGRRYYGGCEYVDKVEALAIERACDLFSANYANVQPHSGAQANAAVFMALVSPGDTV
LGMSLAHGGHLTHGAAPNFSGKHYNAVQYGLKPETGEIDYEEMERLAREHRPKMIIAGFS
AYSRVVDWRRFRAIADEVGAYLMVDMAHVAGLVAAGLYPSPVPYAHVVTTTTHKTLRGPR
GGLILSADGDESLYKKLNGAVFPGQQGGPLMHVIAAKAVAFKEAMNQDFVRYQQKVIDNA
KAMAAVFVERGYDVVSGGTDDHLFLVSLIRQGITGKDADAALGRAHITVNKNTVPNDPQS
PFVTSGLRIGTPAVTTRGFDADECAELAEWICDILDELAAGVDTTHIESRVRANVAEVCA
RHPVYGAAVTESVESIA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagaataatttttccccccgtgcccgattagcccagtacgatacgctgctcgcc
gaagccatgaccgaagaaacggcacgccaggaagcgcatatcgaattgatcgcctccgaa
aactacaccagcaaggtcgtcatggaggcccaggggtctcagctcaccaataagtacgcg
gaggggtatccgggccgccgctactacggtggctgcgaatacgtcgacaaagtcgaagcg
ctcgccatcgagcgtgcctgtgatctgttcagcgccaactacgccaacgttcagccgcac
tccggcgcccaggccaacgccgcggtcttcatggccctggtctctccgggtgataccgtg
ctgggcatgagcctggcccacggcggccacctgacccacggtgccgcgcccaacttctcc
ggcaagcactacaacgccgtgcagtatggtctcaaaccggagaccggcgagatcgattac
gaagagatggagcgtttggcccgcgagcaccgccccaagatgatcatcgcaggcttctcg
gcctactcccgcgtggtggactggcggcgttttcgcgccatcgccgacgaagtgggcgct
tacctgatggtcgatatggcccacgtggcgggtctggtcgcggcgggtttgtatcccagt
cccgtgccctacgctcacgtcgtgaccacgacgacccacaagacgctgcgcggcccccgc
ggcgggctgattctctcggcagacggtgacgagtcactctacaagaagctcaatggcgcc
gtctttcccggccagcaaggcggcccactcatgcacgtgatcgcggccaaggccgtggcc
ttcaaagaggcgatgaatcaggacttcgtgcgctaccagcagaaggtgatcgataacgcc
aaagcgatggcggccgtattcgtcgagcgcggctacgacgtggtgtctggcggcaccgac
gaccatctcttcctcgtgtcgctgattcgccagggcatcaccggtaaagacgcggatgcg
gccttgggtcgtgcgcacattacggtcaataaaaacaccgttcccaacgatccgcaaagc
cccttcgtgacctctggcttgcgtattggcacgcccgcagtcactacgcgcggattcgat
gccgacgagtgtgccgaacttgcggaatggatttgcgacattctcgatgagctggccgcc
ggcgtggataccactcatatcgaaagccgggtgcgtgccaacgtggccgaggtgtgtgct
cgtcacccggtgtatggcgctgccgttactgaatccgtcgaatccattgcttga
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