Vreelandella piezotolerans: GYM47_06225
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Entry
GYM47_06225 CDS
T07036
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpiz03032
]
GYM47_06225
03036 Chromosome and associated proteins [BR:
hpiz03036
]
GYM47_06225
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_06225
DNA replication proteins [BR:
hpiz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GYM47_06225
Chromosome and associated proteins [BR:
hpiz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GYM47_06225
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GYM47_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QJA23735
LinkDB
All DBs
Position
complement(1356701..1356997)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSAKEVETAVRIILDDMTDALANGGRVEIRGFGSFSLHYREPRT
GRNPKTGDPVDLDGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaattaatcgaacaaattgcgatgcgtcaaccggagctatccgccaaa
gaagtcgagacggcggtgcgtattatcttggacgatatgaccgatgcgcttgccaacgga
gggcgagtggagatacgtggttttggcagtttctcgcttcactatcgcgagccgcgcaca
gggcgcaatcctaaaaccggtgacccggtggacctggatggcaagtacgtcccgcatttc
aaaccgggcaaggagttgcgcgagcaagtcgacgccagtcgtgcgctcggctactga
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