Vreelandella piezotolerans: GYM47_06290
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Entry
GYM47_06290 CDS
T07036
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03030
DNA replication
hpiz03430
Mismatch repair
hpiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYM47_06290 (dnaX)
03430 Mismatch repair
GYM47_06290 (dnaX)
03440 Homologous recombination
GYM47_06290 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpiz03032
]
GYM47_06290 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_06290 (dnaX)
Enzymes [BR:
hpiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYM47_06290 (dnaX)
DNA replication proteins [BR:
hpiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYM47_06290 (dnaX)
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYM47_06290 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_18
AAA_30
AAA_2
AAA_19
Trypan_PARP
Mg_chelatase
nSTAND3
AAA_28
TsaE
AAA_24
Rad17
Herpes_Helicase
NTPase_1
SKI
Motif
Other DBs
NCBI-ProteinID:
QJA23743
LinkDB
All DBs
Position
1365240..1367225
Genome browser
AA seq
661 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGITSTPCGQCDSCQAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFT
LKHMPPERVVEHLTYVLGQEGVDYDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAVRH
ADVAAMLGTLDHRHVLALVDALADVDVQKLLAEVAQLAEQGPDFAAVLDELTATLHRLAV
AQMVPDAVDNSHGDRAQIQQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPPVTPLPLRREPASDTSAPAEASTETATSVDGSSTKKPEPASVVAGDSP
QAPAEVQASAAHEDDAGSALSLPTGAERDESEPPPWSLEEVEHTATLAPEPEPEPEPEPE
PEPEPEPEPEPEPEPEPEPEPEPEPEPHDASLVAATSEVTPEPVTELGRWDHKTWLAHFD
ALGLGGLTRNLAAHCQLESDDGQTVILRLDPSQSAMQADVHNGRIERALKALGLTRKLQF
SVAELDTALETPRQQEERLLQERHAQAVDLLHHDPNIQKLQQAFGATLIESSVKPTPAAR
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaagtggcggccacgtacattccacgagctcgtgggc
caggcccatgttcaacgcgccctggtcaatgctcttgaccagggccgtttgcatcatgcc
tacctctttaccggcacgcgaggcgtcggcaaaaccaccctggcgcgcatcttggcaaag
tgcctcaactgcacggcgaatgggcgcggcgacgaaggcattacctcgaccccctgtggt
cagtgtgatagctgccaagccatcgacgaggggcgcttcgtcgacctgatcgaagtcgat
gctgcctcgcgtaccaaagtggaagacacccgcgagctgctcgataatgtccagtacgcg
cctacacaagggcgctataaagtgtatctcatcgacgaggtacatatgctgtccaccagc
agtttcaacgcgctgctgaaaacgctggaagaacccccgccccacgtcaagtttctgctg
gcgacgaccgacccgcagaaactcccggccaccgttttgtcacgttgtctgcagtttacg
ctcaagcacatgccgcctgagcgtgtcgtcgagcatttgacctacgtgctggggcaagag
ggcgtcgattacgacgagagcgcgctgtggctgctgggcaaagccgccgaaggctccatg
cgtgacgctatgagtctgaccgatcaagcgattgcgttcggccaaggcgccgttcggcac
gccgatgtggcggccatgctgggtacgctggatcatcgccatgtgctcgcgctcgtcgat
gccttggcagatgtggacgtgcagaagctgttggcggaagtggcgcagttggccgaacag
gggccggattttgccgccgtgctagacgagctgacggccactcttcatcgcttggccgtg
gcgcagatggtgcccgatgctgtggataacagtcacggtgatcgtgcgcagatccagcag
ttggccagccgttttaccgccgaagacattcagctctactaccagattggtattcaggga
cgtggcgacatggtgcatgccccggatttgcgcagcgccttggaaatgaccttgttgcgt
atgctggccttccgcccccagggcgtgccgaaaccgccggtaacgccgttaccgctacgc
cgcgagcccgcctccgatacgagcgcacccgccgaggcatcaaccgagaccgctacttct
gtcgacggatctagcacaaaaaagcctgagcctgcatccgtagtcgccggggactcgccc
caagcgcctgctgaggtgcaggcttcagcggctcatgaggatgatgcgggctcggccttg
tctttgccgactggcgccgaacgagacgagtcggagcccccgccctggtcgcttgaagaa
gtggaacatacggctacgctcgcgccagagccagagccagagccagagccagagccagag
ccagagccagagccagagccagagccagagccagagccagagccagagccagagccagag
ccagagccagagccagagccacatgacgcctctttggttgctgcgacgtctgaagtcaca
cccgaacccgtgaccgagcttggtcgttgggaccataagacgtggttagcccattttgac
gcgttgggtttgggaggcttgacgcgcaatttggcggcacattgccagttggagagcgat
gatgggcagaccgtgatactgcggctcgaccccagtcagtcggccatgcaagccgatgtg
cacaatggacgaatcgagcgtgcgctcaaggcgttggggttgacaagaaagcttcagttc
agcgtcgccgagctagacacggcgctggaaacgcctcgccagcaagaagaacgcctgctg
caggagcgccacgcacaggcagttgatctattgcatcacgaccccaatatccagaagcta
cagcaggcgtttggggctacgctcattgagtcgtccgtcaaaccgacgccagcggcacgc
tcttaa
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